RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ZNF69Q9UC07 566 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 CGGBP1Q9UFW8 167 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-202ENST00000374426 POLR3KQ9Y2Y1 108 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-202ENST00000374426 SH3GLB1Q9Y371 365 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 NPTNQ9Y639 398 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 DNAJC9-AS1A6NH13 148 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 TRAPPC2LH3BP13 241 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 H3BSA7 217 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 SHOX2O60902 331 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-202ENST00000374426 OR5F1O95221 314 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 VIMP08670 466 aaKnown RBP11.63□□□□□ -0.55
CXCL12-202ENST00000374426 SBK2P0C263 348 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 LAP3P28838 519 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 TAS2R41P59536 307 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 SEC61A1P61619 476 aaKnown RBP11.63□□□□□ -0.55
CXCL12-202ENST00000374426 TNFAIP6P98066 277 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-202ENST00000374426 PIN1Q13526 163 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-202ENST00000374426 NFYCQ13952 458 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 ZMAT1Q5H9K5 638 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 ZNF774Q6NX45 483 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 ALDH16A1Q8IZ83 802 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 BCL6BQ8N143 479 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-202ENST00000374426 DCLRE1CQ96SD1 692 aaKnown RBP11.63□□□□□ -0.55
CXCL12-202ENST00000374426 DIRC2Q96SL1 478 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 TMEM106BQ9NUM4 274 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 EGFL7Q9UHF1 273 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 RIMS3Q9UJD0 308 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 NUP50Q9UKX7 468 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 AUP1Q9Y679 476 aa11.63□□□□□ -0.55
CXCL12-202ENST00000374426 GMNCA6NCL1 334 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 IGHMP01871 453 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 CST2P09228 141 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 NR2C1P13056 603 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 ZNF12P17014 697 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 PSG7Q13046 419 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 ZNF154Q13106 437 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 CDK5R2Q13319 367 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 TOP3AQ13472 1001 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-202ENST00000374426 ALG10Q5BKT4 473 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 ARMCX4Q5H9R4 360 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 MTX3Q5HYI7 312 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 BEND6Q5SZJ8 279 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-202ENST00000374426 AGBL2Q5U5Z8 902 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 FOXL2NBQ6ZUU3 175 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 TSPEARQ8WU66 669 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 STON2Q8WXE9 905 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 C4orf45Q96LM5 186 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 ZNF48Q96MX3 618 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-202ENST00000374426 ALG12Q9BV10 488 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 POLR2J2Q9GZM3 115 aaKnown RBP11.62□□□□□ -0.55
CXCL12-202ENST00000374426 POLR2J3Q9H1A7 115 aaKnown RBP11.62□□□□□ -0.55
CXCL12-202ENST00000374426 ELOVL3Q9HB03 270 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 PATZ1Q9HBE1 687 aaKnown RBP11.62□□□□□ -0.55
CXCL12-202ENST00000374426 PLEK2Q9NYT0 353 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 HIF3AQ9Y2N7 669 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 MED31Q9Y3C7 131 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 TIMM10BQ9Y5J6 103 aa11.62□□□□□ -0.55
CXCL12-202ENST00000374426 TIMM8AO60220 97 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-202ENST00000374426 PIP5K1CO60331 668 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 OR1E2P47887 323 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 SLC6A9P48067 706 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 RPL27P61353 136 aaKnown RBP11.61□□□□□ -0.55
CXCL12-202ENST00000374426 PCBD1P61457 104 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 ENDOGQ14249 297 aaKnown RBP11.61□□□□□ -0.55
CXCL12-202ENST00000374426 ZMYND11Q15326 602 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 TAF11Q15544 211 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 TMEM155Q4W5P6 130 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 RABL3Q5HYI8 236 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 NANOGP8Q6NSW7 305 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 Q6ZR03 302 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 LRRC28Q86X40 367 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-202ENST00000374426 KLHL36Q8N4N3 616 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 SPICQ8N5J4 248 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 ZNF283Q8N7M2 679 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 THOC1Q96FV9 657 aaKnown RBP11.61□□□□□ -0.55
CXCL12-202ENST00000374426 RBP7Q96R05 134 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 SIGLEC11Q96RL6 698 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 GPA33Q99795 319 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 POFUT1Q9H488 388 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 BAG5Q9UL15 447 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 INSIG2Q9Y5U4 225 aa11.61□□□□□ -0.55
CXCL12-202ENST00000374426 PRKDCP78527 4128 aaKnown RBP11.61□□□□□ -0.55
CXCL12-202ENST00000374426 WNK1Q9H4A3 2382 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 A8MXK9 166 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 F5H0A9 414 aaPredicted RBP11.6□□□□□ -0.55
CXCL12-202ENST00000374426 FBP2O00757 339 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 ABHD16AO95870 558 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 SCG5P05408 212 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 RNASE1P07998 156 aaKnown RBP11.6□□□□□ -0.55
CXCL12-202ENST00000374426 THRBP10828 461 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 ARHGDIAP52565 204 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 BTG1P62324 171 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 BAMBIQ13145 260 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 ZER1Q7Z7L7 766 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 IGFN1Q86VF2 1251 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 CALHM3Q86XJ0 350 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 LRRC75AQ8NAA5 344 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 OR2Z1Q8NG97 314 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 FNDC8Q8TC99 324 aa11.6□□□□□ -0.55
CXCL12-202ENST00000374426 SAMD8Q96LT4 415 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms