RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 RFX4Q33E94 735 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 PDZD11Q5EBL8 140 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ARMCX4Q5H9R4 360 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 EARS2Q5JPH6 523 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 MIIPQ5JXC2 388 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 FAM45BPQ6NSW5 357 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 BTNL3Q6UXE8 466 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 RBMS3Q6XE24 437 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 KYAT3Q6YP21 454 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 TMPRSS11FQ6ZWK6 438 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 APTXQ7Z2E3 356 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 OR2W3Q7Z3T1 314 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 MDGA2Q7Z553 956 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ACOT1Q86TX2 421 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 CHSY1Q86X52 802 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 GPSM1Q86YR5 675 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 LACC1Q8IV20 430 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ZNF561Q8N587 486 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ATP6V0D2Q8N8Y2 350 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 FAM98AQ8NCA5 519 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 OR6M1Q8NGM8 313 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 OR9A4Q8NGU2 314 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 OR6K2Q8NGY2 324 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 NANPQ8TBE9 248 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 FAM110BQ8TC76 370 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 RASSF5Q8WWW0 418 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 SNAPC3Q92966 411 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 TMBIM1Q969X1 311 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 CREB3L1Q96BA8 519 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ANKRD9Q96BM1 317 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 RBMXL1Q96E39 390 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 MRPL53Q96EL3 112 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ZNF597Q96LX8 424 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ZNF582Q96NG8 517 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 SNX18Q96RF0 628 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 MICU1Q9BPX6 476 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 SLC35A5Q9BS91 424 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 TMED9Q9BVK6 235 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 FUNDC2Q9BWH2 189 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 SLC2A11Q9BYW1 496 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ELOVL4Q9GZR5 314 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 LINC00597Q9H2U6 94 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 PLEKHA1Q9HB21 404 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 SEBOXQ9HB31 216 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 EML4Q9HC35 981 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 FZD3Q9NPG1 666 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ABHD10Q9NUJ1 306 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 RMND1Q9NWS8 449 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 SLC17A6Q9P2U8 582 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 NUP50Q9UKX7 468 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 TMED7Q9Y3B3 224 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 OR51B4Q9Y5P0 310 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 STYXL1Q9Y6J8 313 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 A3GALT2U3KPV4 340 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 V9GYY9 64 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 NUMA1Q14980 2115 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 ZNF106Q9H2Y7 1883 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 POLEQ07864 2286 aa3.09□□□□□ -1.91
ECHDC1-205ENST00000368295 TRBV9A0A0B4J1U6 114 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 NPIPA5A0A0B4J1W7 369 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 PVALEFA0A1B0GWK0 134 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 SERINC4A6NH21 518 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 E5RJQ4 531 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 NPIPA5E9PKD4 350 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 ATP6V1G2-DDX39BF2Z307 99 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 H0Y980 276 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 AP4M1O00189 453 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 SIRPB1O00241 398 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 DCTN6O00399 190 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 OR7A17O14581 309 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 TFECO14948 347 aaPredicted RBP3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 SLC31A1O15431 190 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 CHP2O43745 196 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 MED6O75586 246 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 TNFAIP8O95379 198 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 UTS2O95399 124 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 ESRRBO95718 433 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 IFNA21P01568 189 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 ORM1P02763 201 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 HLA-GP17693 338 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 TBXA2RP21731 343 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 GPR1P46091 355 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 CHN2P52757 468 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 MAZP56270 477 aaKnown RBP3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 PAX2Q02962 417 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 CDH18Q13634 790 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 RAB31Q13636 194 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 CDSNQ15517 529 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 TAF1AQ15573 450 aaPredicted RBP3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 SNAI3Q3KNW1 292 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 PXDC1Q5TGL8 231 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 LYPLAL1Q5VWZ2 237 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 ZFP1Q6P2D0 407 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 ZNF841Q6ZN19 808 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 CPEB2Q7Z5Q1 589 aaKnown RBP3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 WDR53Q7Z5U6 358 aaPredicted RBP3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 NOXA1Q86UR1 476 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 PIM3Q86V86 326 aa3.09□□□□□ -1.92
ECHDC1-205ENST00000368295 LDLRAD3Q86YD5 345 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms