RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 TTC25Q96NG3 672 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 IP6K3Q96PC2 410 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC30A2Q9BRI3 323 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 SRMSQ9H3Y6 488 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 FAM96AQ9H5X1 160 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 MRPL47Q9HD33 250 aaKnown RBP4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 AGPAT4Q9NRZ5 378 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 SMOXQ9NWM0 555 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 HEY1Q9Y5J3 304 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 ARL5AQ9Y689 179 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 PCNX1Q96RV3 2341 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 ACANP16112 2415 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 IGLV3-16A0A075B6K0 115 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 GSAPA4D1B5 854 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 VSTM2BA6NLU5 285 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 CCT8L1PA6NM43 557 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 C9J4A7 227 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 CCL22O00626 93 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR1F1O43749 312 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 EFNA2O43921 213 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 GMFGO60234 142 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR2B3O76000 313 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 HPP00738 406 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 F10P00742 488 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 UGT2B7P16662 529 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 MMP11P24347 488 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 ACVR1BP36896 505 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 SSR1P43307 286 aaKnown RBP4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR1D4P47884 311 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 PRLHRP49683 370 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 HNMTP50135 292 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 ARFIP1P53367 373 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 PJVKQ0ZLH3 352 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC1A5Q15758 541 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 SPESP1Q6UW49 350 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 STAC2Q6ZMT1 411 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 NCCRP1Q6ZVX7 275 aaPredicted RBP4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 LRRC70Q7Z2Q7 622 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF567Q8N184 647 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 BPIFB2Q8N4F0 458 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 CLDN19Q8N6F1 224 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 LINC01555Q8NAE3 123 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR5AR1Q8NGP9 310 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR13C4Q8NGS5 318 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 M1APQ8TC57 530 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 PNPT1Q8TCS8 783 aaKnown RBP4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 BLOC1S5Q8TDH9 187 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 C8orf44Q96CB5 159 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 CNDP1Q96KN2 507 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF285Q96NJ3 590 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 ALG12Q9BV10 488 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 HCAR1Q9BXC0 346 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 CHRNA10Q9GZZ6 450 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 TRABDQ9H4I3 376 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 EXOSC3Q9NQT5 275 aaKnown RBP4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 IMPAD1Q9NX62 359 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF581Q9P0T4 197 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 STOX2Q9P2F5 926 aaPredicted RBP4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 CTSFQ9UBX1 484 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 GMPPBQ9Y5P6 360 aa4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF106Q9H2Y7 1883 aaKnown RBP4.32□□□□□ -1.72
RNU4-39P-201ENST00000362455 SEC16AO15027 2179 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 A0A1B0GUH1 482 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 HEATR9A2RTY3 570 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 CCL21O00585 134 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 STX7O15400 261 aaKnown RBP4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZSCAN12O43309 604 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 SRPX2O60687 465 aaPredicted RBP4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 CRLF1O75462 422 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 SRP72O76094 671 aaKnown RBP4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 TPM2P07951 284 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 UMPSP11172 480 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 BCKDHAP12694 445 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 ACADSP16219 412 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 CA7P43166 264 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 ALDH3B2P48448 385 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 RGS4P49798 205 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 IST1P53990 364 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 DYNLT1P63172 113 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 GRB7Q14451 532 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 ATXN7L3Q14CW9 347 aaPredicted RBP4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 HADHQ16836 314 aaKnown RBP4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 ATAD3BQ5T9A4 648 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF600Q6ZNG1 722 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 GLT6D1Q7Z4J2 308 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 GTSCR1Q86UQ5 136 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 TMEM17Q86X19 198 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 PIANPQ8IYJ0 282 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZSCAN4Q8NAM6 433 aaPredicted RBP4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR4K2Q8NGD2 314 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 CNIH3Q8TBE1 160 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 SPRYD4Q8WW59 207 aaPredicted RBP4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 TFGQ92734 400 aaPredicted RBP4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 SDSLQ96GA7 329 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 APOL2Q9BQE5 337 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 TM2D1Q9BX74 207 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 ASB8Q9H765 288 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 FANCEQ9HB96 536 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 CLEC5AQ9NY25 188 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 MRPL39Q9NYK5 338 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms