RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 RASGEF1BQ0VAM2 473 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 ZMAT1Q5H9K5 638 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 LINC00346Q8IVM7 164 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 OR13C5Q8NGS8 318 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 OR2G2Q8NGZ5 317 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 ST7LQ8TDW4 575 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 RNF128Q8TEB7 428 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 KCNS3Q9BQ31 491 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 ZDHHC11Q9H8X9 412 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 CYB5R1Q9UHQ9 305 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 FOXD3Q9UJU5 478 aaPredicted RBP16.09■□□□□ 0.17
VIM-201ENST00000224237 TRAV17A0A0B4J275 112 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 SHISA3A0PJX4 238 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 ZNF254O75437 659 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 ARL6IP5O75915 188 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 BMP4P12644 408 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 SRYQ05066 204 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 FDX2Q6P4F2 183 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 DEGS2Q6QHC5 323 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 OR5AK2Q8NH90 309 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 PHYHIPQ92561 330 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 MAP6Q96JE9 813 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 DCBLD2Q96PD2 775 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 SMAD5Q99717 465 aaKnown RBP16.08■□□□□ 0.17
VIM-201ENST00000224237 COMMD4Q9H0A8 199 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 SMURF1Q9HCE7 757 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 TBCCD1Q9NVR7 557 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 ETAA1Q9NY74 926 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 LRP12Q9Y561 859 aa16.08■□□□□ 0.17
VIM-201ENST00000224237 DMXL2Q8TDJ6 3036 aa16.08■□□□□ 0.16
VIM-201ENST00000224237 TMEM212A6NML5 194 aa16.08■□□□□ 0.16
VIM-201ENST00000224237 GUCA1AP43080 201 aaPredicted RBP16.08■□□□□ 0.16
VIM-201ENST00000224237 KCNMB1Q16558 191 aa16.08■□□□□ 0.16
VIM-201ENST00000224237 ZNF544Q6NX49 715 aa16.08■□□□□ 0.16
VIM-201ENST00000224237 MFSD4AQ8N468 514 aa16.08■□□□□ 0.16
VIM-201ENST00000224237 PPIL3Q9H2H8 161 aaKnown RBP16.08■□□□□ 0.16
VIM-201ENST00000224237 C1orf198Q9H425 327 aa16.08■□□□□ 0.16
VIM-201ENST00000224237 LDAHQ9H6V9 325 aa16.08■□□□□ 0.16
VIM-201ENST00000224237 PLEKHB1Q9UF11 243 aaPredicted RBP16.08■□□□□ 0.16
VIM-201ENST00000224237 POLR1DQ9Y2S0 133 aa16.08■□□□□ 0.16
VIM-201ENST00000224237 MGAQ8IWI9 3026 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 URB1O60287 2271 aaKnown RBP16.07■□□□□ 0.16
VIM-201ENST00000224237 ZNF407Q9C0G0 2248 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 PFDN1O60925 122 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 CFL1P23528 166 aaKnown RBP16.07■□□□□ 0.16
VIM-201ENST00000224237 CDAP32320 146 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 INAQ16352 499 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 FAM27D1Q5T7N8 215 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 OR7E24Q6IFN5 339 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 SPATC1Q76KD6 591 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 TPRA1Q86W33 373 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 C20orf196Q8IYI0 205 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 CHPT1Q8WUD6 406 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 RNF133Q8WVZ7 376 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 PPP1R14BQ96C90 147 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 C4orf45Q96LM5 186 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 OR14A2Q96R54 314 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 ULBP2Q9BZM5 246 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 POLE4Q9NR33 117 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 FAIMQ9NVQ4 179 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 MCTS1Q9ULC4 181 aaKnown RBP16.07■□□□□ 0.16
VIM-201ENST00000224237 UGT2A1Q9Y4X1 527 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 LIPGQ9Y5X9 500 aa16.07■□□□□ 0.16
VIM-201ENST00000224237 ACACAQ13085 2346 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 TRGV5A0A0B4J1U4 118 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 OR4C45A6NMZ5 311 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 SLC43A1O75387 559 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 SYNGR4O95473 234 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 WNT11O96014 354 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 ITGB2P05107 769 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 UCHL1P09936 223 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 CCR9P51686 369 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 RGS21Q2M5E4 152 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 PHYHD1Q5SRE7 291 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 CORO6Q6QEF8 472 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 UNQ9370/PRO34162Q6UXP9 181 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 SNIP1Q8TAD8 396 aaKnown RBP16.06■□□□□ 0.16
VIM-201ENST00000224237 ABHD3Q8WU67 409 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 COX4I2Q96KJ9 171 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 NELFAQ9H3P2 528 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 EXO5Q9H790 373 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 EMC7Q9NPA0 242 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 LHFPL6Q9Y693 200 aa16.06■□□□□ 0.16
VIM-201ENST00000224237 TRAV1-2A0A0B4J238 106 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 SMIM30A4D0T7 59 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 ZNF879B4DU55 563 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 DHHO43323 396 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 LSM6P62312 80 aaKnown RBP16.05■□□□□ 0.16
VIM-201ENST00000224237 PMP22Q01453 160 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 WDR38Q5JTN6 314 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 RNFT1Q5M7Z0 435 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 DCDC5Q6ZRR9 648 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 FOXL2NBQ6ZUU3 175 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 AAED1Q7RTV5 226 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 PRSS35Q8N3Z0 413 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 ZNF676Q8N7Q3 588 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 OR2AJ1Q8NGZ0 328 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 RGP1Q92546 391 aaPredicted RBP16.05■□□□□ 0.16
VIM-201ENST00000224237 SLAMF6Q96DU3 332 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 DEFB127Q9H1M4 99 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms