RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Olfr1135Q7TR42 310 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 IfnkQ7TSL0 199 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Tmem255aQ8BHW5 351 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Sdhaf4Q8BTE0 104 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ptges2Q8BWM0 384 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Peli1Q8C669 418 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Dync2li1Q8K0T2 351 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr1484Q8VEU6 315 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr1393Q8VFA7 311 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr771Q8VFH6 317 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr828Q8VFM8 312 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr378Q8VGT2 314 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r43Q8VIC9 329 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Abhd3Q91ZH7 411 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Cd209dQ91ZW8 237 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ddx28Q9CWT6 540 aaKnown RBP13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Slc38a3Q9DCP2 505 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r100Q9EPS5 307 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 GhrlQ9EQX0 117 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Tor3aQ9ER38 385 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Dock7Q8R1A4 2130 aaKnown RBP13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gm5678A0A1B0GRG8 277 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Mptx2D3YYJ7 219 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Calhm1D3Z291 348 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Zfp108E9Q8I5 642 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gm2663F6R7E8 247 aaKnown RBP13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gm8888J3QPX5 126 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Rad51dO55230 329 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Shisa6Q3UH99 525 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Pgap1Q3UUQ7 922 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gm2aQ60648 193 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Fkbp10Q61576 581 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 McubQ810S1 345 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 F830045P16RikQ8BJ95 487 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Elfn1Q8C8T7 828 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr308Q8VFP2 308 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 CytipQ91VY6 359 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 1810009J06RikQ9CPN7 247 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Prg4Q9JM99 1054 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Dnaja4Q9JMC3 397 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gab1Q9QYY0 695 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Acox1Q9R0H0 661 aaKnown RBP13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Cxcl15Q9WVL7 167 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr115B2RTB9 312 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Fam53aE9PV82 402 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Kcns1O35173 497 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 P01661 131 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 P01662 111 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 P01663 111 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ighg1P01869 393 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Znf271P15620 580 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 PrkcaP20444 672 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Cma1P21844 247 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Mbl2P41317 244 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Thbs2Q03350 1172 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Mex3dQ3UE17 643 aaKnown RBP13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Slc22a14Q497L9 629 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Fstl4Q5STE3 841 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Slc35a1Q61420 336 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Klk8Q61955 260 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Epha6Q62413 1035 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 AI987944Q7TPX5 406 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr1463Q7TQR3 310 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Mboat1Q8BH98 492 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gper1Q8BMP4 375 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Aifm2Q8BUE4 373 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r42Q8VBS7 329 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 SdhbQ9CQA3 282 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Plpp6Q9D4F2 292 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 GmfgQ9ERL7 142 aa13.32□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ighv1-54A0A075B5W5 117 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 ItgamP05555 1153 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 TpbpaP13438 124 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Zfp36P22893 319 aaKnown RBP13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Pcyt1aP49586 367 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Actc1P68033 377 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Acta1P68134 377 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Shc1P98083 579 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gm7534Q3UU21 679 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Pate2Q3UW31 111 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr776Q7TRI3 312 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Rxfp3Q8BGE9 472 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Kctd7Q8BJK1 289 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ddit4lQ8VHZ5 193 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Sntb1Q99L88 537 aaKnown RBP13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 PsphQ99LS3 225 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Exosc5Q9CRA8 235 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gabra4Q9D6F4 552 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Phf7Q9DAG9 307 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Med29Q9DB91 199 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Pde4dipQ80YT7 2224 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Dpy19l1A6X919 746 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Scgb2b3D2XZ38 112 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr610E9Q598 315 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Fbxw28E9Q8A4 466 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r13G5E8I3 300 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Rasd1O35626 280 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Fcn2O70497 314 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 PitpnaP53810 271 aaKnown RBP13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Fgf9P54130 208 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 73.2 ms