RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 RAD50Q92878 1312 aa3.96□□□□□ -1.77
FAM49B-230ENST00000639004 ZNF609O15014 1411 aa3.96□□□□□ -1.77
FAM49B-230ENST00000639004 ATRNO75882 1429 aa3.96□□□□□ -1.77
FAM49B-230ENST00000639004 NUP188Q5SRE5 1749 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 IGLV3-22A0A075B6J6 115 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 GOLGA6L7A0A1B0GV03 622 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 A6NDX4 124 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 CIB2O75838 187 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 GAPDHP04406 335 aaKnown RBP3.96□□□□□ -1.78
FAM49B-230ENST00000639004 TDGF1P13385 188 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 LONP1P36776 959 aaKnown RBP3.96□□□□□ -1.78
FAM49B-230ENST00000639004 TDGF1P3P51864 188 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 TRDNQ13061 729 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 ZMYND11Q15326 602 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 HADHQ16836 314 aaKnown RBP3.96□□□□□ -1.78
FAM49B-230ENST00000639004 PHYHD1Q5SRE7 291 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 H2BFWTQ7Z2G1 175 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 TPRX1Q8N7U7 411 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 Q8N9W7 124 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 ACER1Q8TDN7 264 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 NT5C3BQ969T7 300 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 PELOQ9BRX2 385 aaKnown RBP3.96□□□□□ -1.78
FAM49B-230ENST00000639004 FAIM2Q9BWQ8 316 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 SLC7A5P2Q9GIP4 190 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 RANBP3Q9H6Z4 567 aaPredicted RBP3.96□□□□□ -1.78
FAM49B-230ENST00000639004 RAB20Q9NX57 234 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 MED23Q9ULK4 1368 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 LAMB4A4D0S4 1761 aa3.96□□□□□ -1.78
FAM49B-230ENST00000639004 CCDC171Q6TFL3 1326 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 ARFGEF2Q9Y6D5 1785 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 ABCC12Q96J65 1359 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 A0A1W2PPE3 182 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 CCDC182A6NF36 153 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 FAM47DPA6NHR8 397 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 FAM166BA8MTA8 275 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 C12orf71A8MTZ7 269 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 HAS3O00219 553 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 CA11O75493 328 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 OR7A10O76100 309 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 NPPAP01160 153 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 MMP1P03956 469 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 S100A6P06703 90 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 TPM3P06753 285 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 ATP1B2P14415 290 aaPredicted RBP3.95□□□□□ -1.78
FAM49B-230ENST00000639004 ETS2P15036 469 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 CSNK1DP48730 415 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 LHX2P50458 406 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 MAP3K7CLP57077 242 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 ERVK-25P63136 954 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 ZNF77Q15935 545 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 LRRC10Q5BKY1 277 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 ZNF429Q86V71 674 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 ARIH2OSQ8N7S6 290 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 RNF185Q96GF1 192 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 C12orf42Q96LP6 360 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 CNN2Q99439 309 aaKnown RBP3.95□□□□□ -1.78
FAM49B-230ENST00000639004 MTG1Q9BT17 334 aaPredicted RBP3.95□□□□□ -1.78
FAM49B-230ENST00000639004 IQCGQ9H095 443 aaKnown RBP3.95□□□□□ -1.78
FAM49B-230ENST00000639004 CALYQ9NYX4 217 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 TRAPPC4Q9Y296 219 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 NPTNQ9Y639 398 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 VIRMAQ69YN4 1812 aaKnown RBP3.95□□□□□ -1.78
FAM49B-230ENST00000639004 DOT1LQ8TEK3 1739 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 WDR19Q8NEZ3 1342 aa3.95□□□□□ -1.78
FAM49B-230ENST00000639004 TUBGCP6Q96RT7 1819 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 TRBV6-6A0A0A6YYG2 114 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 A0A1W2PNU3 283 aaPredicted RBP3.94□□□□□ -1.78
FAM49B-230ENST00000639004 A0A1W2PPV9 198 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 ERLIN1O75477 346 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 FDFT1P37268 417 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 TAGLN2P37802 199 aaKnown RBP3.94□□□□□ -1.78
FAM49B-230ENST00000639004 CCT6AP40227 531 aaKnown RBP3.94□□□□□ -1.78
FAM49B-230ENST00000639004 CDH4P55283 916 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 RPL23AP62750 156 aaKnown RBP3.94□□□□□ -1.78
FAM49B-230ENST00000639004 PSG5Q15238 335 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 C6orf226Q5I0X4 101 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 CTSL3PQ5NE16 218 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 AP1ARQ63HQ0 302 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 LRRC31Q6UY01 552 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 TGIF2LXQ8IUE1 241 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 NECAB1Q8N987 351 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 OR6X1Q8NH79 312 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 SRSF12Q8WXF0 261 aaKnown RBP3.94□□□□□ -1.78
FAM49B-230ENST00000639004 SMARCD2Q92925 531 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 IL22RA2Q969J5 263 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 C8orf76Q96K31 380 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 MS4A4EQ96PG1 132 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 SLC25A39Q9BZJ4 359 aaPredicted RBP3.94□□□□□ -1.78
FAM49B-230ENST00000639004 HAUS4Q9H6D7 363 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 PARVGQ9HBI0 331 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 NUFIP1Q9UHK0 495 aaKnown RBP3.94□□□□□ -1.78
FAM49B-230ENST00000639004 PEX16Q9Y5Y5 336 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 RREB1Q92766 1687 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 THSD7AQ9UPZ6 1657 aa3.94□□□□□ -1.78
FAM49B-230ENST00000639004 WNK3Q9BYP7 1800 aa3.93□□□□□ -1.78
FAM49B-230ENST00000639004 FAM240BA0A1B0GVZ2 78 aa3.93□□□□□ -1.78
FAM49B-230ENST00000639004 ARHGEF35A5YM69 484 aa3.93□□□□□ -1.78
FAM49B-230ENST00000639004 NKX2-6A6NCS4 301 aa3.93□□□□□ -1.78
FAM49B-230ENST00000639004 CACNG3O60359 315 aa3.93□□□□□ -1.78
FAM49B-230ENST00000639004 GYG1P46976 350 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms