RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ZNF140P52738 457 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 TPPP2P59282 170 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 RAP2BP61225 183 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 H3F3CQ6NXT2 135 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 MEPCEQ7L2J0 689 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 VRK3Q8IV63 474 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 ZNF420Q8TAQ5 688 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 BARHL1Q9BZE3 327 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 PLA2G12AQ9BZM1 189 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 TRIM23P36406 574 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 PRSS48Q7RTY5 328 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 GALNT16Q8N428 558 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 FAM109AQ8N4B1 249 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 SLC7A6Q92536 515 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 ZIC5Q96T25 663 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 ANKRD19PQ9H560 264 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 RANGRFQ9HD47 186 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 PCOLCE2Q9UKZ9 415 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 KNDC1Q76NI1 1749 aa15.62■□□□□ 0.09
CACNA1A-253ENST00000637927 MEIKINA0A087WXM9 373 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 VAMP3Q15836 100 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 YOD1Q5VVQ6 348 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 GGNBP1Q5YKI7 109 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 C7orf43Q8WVR3 580 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 RPUSD4Q96CM3 377 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 IER2Q9BTL4 223 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 ENTPD2Q9Y5L3 495 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 NUBP2Q9Y5Y2 271 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 SEMA3BQ13214 749 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 MFAP5Q13361 173 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 ZNF417Q8TAU3 575 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 TNFRSF13CQ96RJ3 184 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 UBQLN4Q9NRR5 601 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 KCNK2O95069 426 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 PLAUP00749 431 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 PRDX4Q13162 271 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 HES3Q5TGS1 186 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 ZNF425Q6IV72 752 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 LCN8Q6JVE9 175 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 OR1J2Q8NGS2 313 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 PPT2Q9UMR5 302 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 PRKYO43930 277 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 GASTP01350 101 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 STUMQ69YW2 141 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 B3GNT8Q7Z7M8 397 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 LILRA3Q8N6C8 439 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 IGKV3OR2-268A0A0C4DH90 116 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 KLRC4-KLRK1H3BQV0 150 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 HIST1H1TP22492 207 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 HSF1Q00613 529 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 L3MBTL4Q8NA19 623 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 KDF1Q8NAX2 398 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 OR5K2Q8NHB8 316 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 LCORQ96JN0 433 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 PIGQQ9BRB3 760 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 NDFIP1Q9BT67 221 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 IL17CQ9P0M4 197 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 HHLA2Q9UM44 414 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 SLC5A6Q9Y289 635 aa15.61■□□□□ 0.09
CACNA1A-253ENST00000637927 A0A0D9SG52 128 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 CPT2P23786 658 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 PARM1Q6UWI2 310 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 HAVCR2Q8TDQ0 301 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 ATP13A2Q9NQ11 1180 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 PRSS16Q9NQE7 514 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 ZNF391Q9UJN7 358 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 TMED7-TICAM2A0A0A6YYA0 188 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 UNCXA6NJT0 531 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 H0Y8X5 98 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 CSF3P09919 207 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 C14orf79Q96F83 325 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 C1QTNF2Q9BXJ5 285 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 FSCN3Q9NQT6 498 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 TMED7Q9Y3B3 224 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 LTBP3Q9NS15 1303 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 B4GALT3O60512 393 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 SIX1Q15475 284 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 C6orf15Q6UXA7 325 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 MS4A15Q8N5U1 240 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 FZD7O75084 574 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 OR2J2O76002 312 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 TMEM244Q5VVB8 128 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 CCDC190Q86UF4 302 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 FOXC2Q99958 501 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 SMOC1Q9H4F8 434 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 PLA2G3Q9NZ20 509 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 LHX3Q9UBR4 397 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 SLC22A23A1A5C7 686 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 SULT1C2O00338 296 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 SNNO75324 88 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 USF1P22415 310 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 OR10K2Q6IF99 312 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 C11orf40Q8WZ69 217 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 SLCO5A1Q9H2Y9 848 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 SRPK3Q9UPE1 567 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 ZNF701M0R085 212 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 COX7A2P2O60397 106 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 SLC19A1P41440 591 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 SLC35E4Q6ICL7 350 aa15.6■□□□□ 0.09
CACNA1A-253ENST00000637927 RANBP10Q6VN20 620 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms