RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 MEF2CQ06413 473 aaPredicted RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 DMRTC1Q5HYR2 192 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 TEX43Q6ZNM6 134 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 NCCRP1Q6ZVX7 275 aaPredicted RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 PRSS58Q8IYP2 241 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 ZNF557Q8N988 423 aaPredicted RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 C1orf64Q8NEQ6 169 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 OR13G1Q8NGZ3 307 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 OR1P1Q8NH06 330 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 CTNNBL1Q8WYA6 563 aaPredicted RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 SORT1Q99523 831 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 FAIM2Q9BWQ8 316 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 FARSBQ9NSD9 589 aaKnown RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 FAM49BQ9NUQ9 324 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 CGNQ9P2M7 1197 aaKnown RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 DUX4Q9UBX2 424 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 MTUS2Q5JR59 1369 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 A2ML1A8K2U0 1454 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 A2MP01023 1474 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 TCOF1Q13428 1488 aaKnown RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 NLRP1Q9C000 1473 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 PLXNC1O60486 1568 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 INO80Q9ULG1 1556 aaPredicted RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 CEP170BQ9Y4F5 1589 aaPredicted RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 ZC3H13Q5T200 1668 aaKnown RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 EIF2AK4Q9P2K8 1649 aaKnown RBP1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 EHBP1L1Q8N3D4 1523 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 SYCP2Q9BX26 1530 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 MIA2Q96PC5 1412 aa1.15□□□□□ -2.23
PTP4A2-220ENST00000627328 KDM5AP29375 1690 aaKnown RBP1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 IQGAP1P46940 1657 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 ARHGEF5Q12774 1597 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 UGGT1Q9NYU2 1555 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 MED14O60244 1454 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 PZPP20742 1482 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 CCDC141Q6ZP82 1450 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 SHANK2Q9UPX8 1470 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 KANK1Q14678 1352 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 ZNF726A6NNF4 738 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 IGHV2-5P01817 119 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 CCR1P32246 355 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 CA8P35219 290 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 AQP2P41181 271 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 BAMBIQ13145 260 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 C10orf120Q5SQS8 335 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 TRIM40Q6P9F5 258 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 ASCL5Q7RTU5 278 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 ZNF619Q8N2I2 560 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 TRPV1Q8NER1 839 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 CCDC110Q8TBZ0 833 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 TRMT10AQ8TBZ6 339 aaKnown RBP1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 SLC25A46Q96AG3 418 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 MFFQ9GZY8 342 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 SAV1Q9H4B6 383 aaPredicted RBP1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 NIPAL2Q9H841 368 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 UFSP2Q9NUQ7 469 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 RNF14Q9UBS8 474 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 ENOPH1Q9UHY7 261 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 KIAA1257Q9ULG3 409 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 SAMHD1Q9Y3Z3 626 aaKnown RBP1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 CEP152O94986 1710 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 UBR1Q8IWV7 1749 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 RNF17Q9BXT8 1623 aaKnown RBP1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 FBN3Q75N90 2809 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 KDM5DQ9BY66 1539 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 NPHP4O75161 1426 aaPredicted RBP1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 CEP162Q5TB80 1403 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 MYOM3Q5VTT5 1437 aa1.14□□□□□ -2.23
PTP4A2-220ENST00000627328 STRCP1A6NGW2 1772 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 SYNMO15061 1565 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 TIAM1Q13009 1591 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 MED1Q15648 1581 aaPredicted RBP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 MAST1Q9Y2H9 1570 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 NCOA2Q15596 1464 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 MBD5Q9P267 1494 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 CHD2O14647 1828 aaKnown RBP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 XIRP1Q702N8 1843 aaKnown RBP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 MYO5BQ9ULV0 1848 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 SETD1AO15047 1707 aaKnown RBP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 CENPVL3A0A0U1RRI6 287 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 MBLAC1A4D2B0 266 aaPredicted RBP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 J3QKU1 62 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 IDH1O75874 414 aaKnown RBP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 IGHDP01880 384 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 GNAO1P09471 354 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 CD99P14209 185 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 DTYMKP23919 212 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 HRH1P35367 487 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 SERPINB5P36952 375 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 DUSP3P51452 185 aaPredicted RBP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 RPS11P62280 158 aaKnown RBP eCLIP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 SFT2D3Q587I9 215 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 THEM4Q5T1C6 240 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 CEMP1Q6PRD7 247 aaPredicted RBP1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 ARL9Q6T311 187 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 ECHDC2Q86YB7 292 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 ANKFN1Q8N957 763 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 OR4K5Q8NGD3 323 aa1.13□□□□□ -2.23
PTP4A2-220ENST00000627328 OR8U1Q8NH10 309 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms