RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 UCN3Q969E3 161 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 DTNBP1Q96EV8 351 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 C14orf79Q96F83 325 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 FCRL1Q96LA6 429 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 VSTM2LQ96N03 204 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 BTBD9Q96Q07 612 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TMEM109Q9BVC6 243 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 ACPTQ9BZG2 426 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 ROPN1BQ9BZX4 212 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRIM15Q9C019 465 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 STMN4Q9H169 189 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 NXF5Q9H1B4 397 aaKnown RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 DEFB127Q9H1M4 99 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 LIN28AQ9H9Z2 209 aaKnown RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 ROPN1Q9HAT0 212 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 MID1IP1Q9NPA3 183 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 RRAGDQ9NQL2 400 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 B4GALT7Q9UBV7 327 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 PRODH2Q9UF12 536 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TBK1Q9UHD2 729 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 LGALS13Q9UHV8 139 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 BOKQ9UMX3 212 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 PLLPQ9Y342 182 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 MRPS18CQ9Y3D5 142 aaKnown RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 FAM215AQ9Y5M1 114 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF780BQ9Y6R6 833 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 FBN2P35556 2912 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 F8P00451 2351 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 PRRC2AP48634 2157 aaKnown RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 HRNRQ86YZ3 2850 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ITPR3Q14573 2671 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 OTOGQ6ZRI0 2925 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TRBV5-5A0A0J9YX44 114 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 GNG14A0A1W2PPG7 69 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 A0A1W2PR80 420 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 FRG2CA6NGY1 282 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM166BA8MTA8 275 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 NPIPA2E9PIF3 369 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 NPIPA3F8WFD2 350 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 SLC28A1O00337 649 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 COPEO14579 308 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 AZIN1O14977 448 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CDC40O60508 579 aaKnown RBP eCLIP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TSPAN2O60636 221 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ICOSLGO75144 302 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CBR3O75828 277 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TOXO94900 526 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 PSMG1O95456 288 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 EPPINO95925 133 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ACTL6AO96019 429 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 IL3P08700 152 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ANXA4P09525 319 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CT45A8P0DMV1 189 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CT45A9P0DMV2 189 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 NEFHP12036 1026 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CPN1P15169 458 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 PTPN6P29350 595 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 SERPINB5P36952 375 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 FEN1P39748 380 aaKnown RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 PEX19P40855 299 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 RFC3P40938 356 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 PTGDSP41222 190 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 MAP3K8P41279 467 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 FRKP42685 505 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZFP36L2P47974 494 aaKnown RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CDK9P50750 372 aaKnown RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 FOXA1P55317 472 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 FBXW4P57775 412 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 KCNJ2P63252 427 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 DLK1P80370 383 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 MRPS22P82650 360 aaKnown RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 HMGCS1Q01581 520 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TFF3Q07654 80 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF763Q0D2J5 394 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 C2orf80Q0P641 193 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 RASGEF1BQ0VAM2 473 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 SLC25A35Q3KQZ1 300 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 FBXL19-AS1Q494R0 122 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TRMT12Q53H54 448 aaKnown RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CT45A2Q5DJT8 189 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CFAP157Q5JU67 520 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 C1orf185Q5T7R7 199 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 RIPPLY2Q5TAB7 128 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TIGD3Q6B0B8 471 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 RTL6Q6ICC9 239 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM71E1Q6IPT2 247 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 NOXRED1Q6NXP6 359 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 MYPOPQ86VE0 399 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF440Q8IYI8 595 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM9CQ8IZT9 166 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CLYBLQ8N0X4 340 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 MREGQ8N565 214 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 NATD1Q8N6N6 113 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 KLHDC1Q8N7A1 406 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CCNYL1Q8N7R7 359 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 SLC37A3Q8NCC5 494 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR10G3Q8NGC4 313 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR6S1Q8NH40 331 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZPLD1Q8TCW7 415 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 AENQ8WTP8 325 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms