RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 OR52J3Q8NH60 311 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 TMEM239Q8WW34 195 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 TMEM43Q9BTV4 400 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 EMC6Q9BV81 110 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 RBM4Q9BWF3 364 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 ANKRD19PQ9H560 264 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 TMCC3Q9ULS5 477 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 MED31Q9Y3C7 131 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 IGKV1D-42A0A075B6H8 117 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 TRAV36DV7A0A075B6V5 113 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 TRAV20A0A0B4J274 112 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 LOC102725191A0A1B0GVB3 256 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 KPNA4O00629 521 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 RRP9O43818 475 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 OR2T1O43869 369 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 KRT36O76013 467 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 PNPP00491 289 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 CST1P01037 141 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 CBLP22681 906 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 GRPRP30550 384 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 RRM2P31350 389 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 MAGEA2P43356 314 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 MRPS11P82912 194 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 MYBPC1Q00872 1141 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 SCGB2A2Q13296 93 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 OR2T5Q6IEZ7 315 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 ZNF730Q6ZMV8 503 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 WDR88Q6ZMY6 472 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 H1FNTQ75WM6 255 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 ZNF627Q7L945 461 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 ZDHHC22Q8N966 263 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 OR2T29Q8NH02 315 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 FGFBP3Q8TAT2 258 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 TMEM255BQ8WV15 326 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 TXNDC15Q96J42 360 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 PRSS27Q9BQR3 290 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 TMPRSS13Q9BYE2 586 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 SLC19A3Q9BZV2 496 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 DENND2DQ9H6A0 471 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 REEP1Q9H902 201 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 DUSP13Q9UII6 198 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 AP4S1Q9Y587 144 aa14.06□□□□□ -0.16
SHKBP1-215ENST00000597649 A0A1W2PRQ8 180 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 TNFRSF11BO00300 401 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 PRSS23O95084 383 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 PATE4P0C8F1 98 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 MAGEB1P43366 347 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 DGCR6Q14129 220 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 ALKBH6Q3KRA9 238 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 PRR31Q5SQ13 230 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 ZNF813Q6ZN06 617 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 ZNF584Q8IVC4 421 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 PAPD5Q8NDF8 572 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 ACOT11Q8WXI4 607 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 SLC6A7Q99884 636 aa14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 KRCC1Q9NPI7 259 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-215ENST00000597649 NOTCH1P46531 2555 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 TMPRSS2O15393 492 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 PLPP2O43688 288 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 DEAF1O75398 565 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 B4GALT1P15291 398 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 ADRA2CP18825 462 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 GIPRP48546 466 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 PTDSS1P48651 473 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 RAB1AP62820 205 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 RAB39AQ14964 217 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 MFSD13AQ14CX5 517 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 AVPI1Q5T686 147 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 FAM69AQ5T7M9 428 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 ACSM5Q6NUN0 579 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 C1QL2Q7Z5L3 287 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 RNF113BQ8IZP6 322 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 STMN2Q93045 179 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 SLCO4A1Q96BD0 722 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 DUS3LQ96G46 650 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 LRR1Q96L50 414 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 TSPAN32Q96QS1 320 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 ZNF426Q9BUY5 554 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 ASPNQ9BXN1 380 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 ZNF665Q9H7R5 613 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 MAN2C1Q9NTJ4 1040 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 MED29Q9NX70 200 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 SAMHD1Q9Y3Z3 626 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 PCDHGB1Q9Y5G3 927 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 NOX1Q9Y5S8 564 aa14.04□□□□□ -0.16
SHKBP1-215ENST00000597649 ARHGAP32A7KAX9 2087 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 A0A087WUU8 490 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 HTR3EA5X5Y0 456 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 CDC14BO60729 498 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 TIPRLO75663 272 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 CH25HO95992 272 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 CLPTM1O96005 669 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 HIST1H2ABP04908 130 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 FCGR1AP12314 374 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 IFI30P13284 250 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 LIMS1P48059 325 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 UGT2B15P54855 530 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 MVKQ03426 396 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 ZFP1Q6P2D0 407 aa14.03□□□□□ -0.16
SHKBP1-215ENST00000597649 TBPL2Q6SJ96 375 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms