RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 M0R233 179 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 FAAHO00519 579 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 CTDSP2O14595 271 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 LDLRAD4O15165 306 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 SYNGR3O43761 229 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 MTRF1O75570 445 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 AKR7A3O95154 331 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 BCL10O95999 233 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 TFP02787 698 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 DBIP07108 87 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 CHRM4P08173 479 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 ADRA2AP08913 450 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 NCF2P19878 526 aaPredicted RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 ACHEP22303 614 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 ECHS1P30084 290 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 THBS4P35443 961 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 GPR6P46095 362 aaPredicted RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 EVX1P49640 407 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 COMPP49747 757 aaPredicted RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 TMEM33P57088 247 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 RPS23P62266 143 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 SLC25A3Q00325 362 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 GALK2Q01415 458 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 POU3F1Q03052 451 aaPredicted RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 EMX2Q04743 252 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 LGALS3BPQ08380 585 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 C1DQ13901 141 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 MAPK14Q16539 360 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 TRMT5Q32P41 509 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 UGT3A2Q3SY77 523 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF311Q5JNZ3 666 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 GKAP1Q5VSY0 366 aaPredicted RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 PRAMEF8Q5VWM4 474 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 PRAMEF7Q5VXH5 474 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 WBP2NLQ6ICG8 309 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 NIPAL3Q6P499 406 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 TNFAIP8L2Q6P589 184 aaPredicted RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 LRRC74BQ6ZQY2 392 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 RBPMS2Q6ZRY4 209 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 ZCCHC23Q6ZST2 131 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 PTCHD4Q6ZW05 846 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 USP43Q70EL4 1123 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 CREB3L2Q70SY1 520 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 RIMKLAQ8IXN7 391 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 KIRREL3Q8IZU9 778 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 SVOPLQ8N434 492 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 ZIC4Q8N9L1 334 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 SPERTQ8NA61 448 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 NOA1Q8NC60 698 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 HIPK4Q8NE63 616 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 PIK3C3Q8NEB9 887 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 OR8J2Q8NGG1 315 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 OR51F2Q8NH61 342 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 SUN5Q8TC36 379 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 CKAP2Q8WWK9 683 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 CNOT9Q92600 299 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 RDH5Q92781 318 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 BCL2L2Q92843 193 aaPredicted RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 TMEM186Q96B77 213 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF385AQ96PM9 386 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 DOK1Q99704 481 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 MECRQ9BV79 373 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 SUCNR1Q9BXA5 334 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 DENND2DQ9H6A0 471 aaPredicted RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 B3GAT2Q9NPZ5 323 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 SLC52A3Q9NQ40 469 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 HIF1ANQ9NWT6 349 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 CALML5Q9NZT1 146 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 CRNNQ9UBG3 495 aaPredicted RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF346Q9UL40 294 aaKnown RBP4.79□□□□□ -1.64
DNMT1-220ENST00000589351 USP22Q9UPT9 525 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 RCE1Q9Y256 329 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.79□□□□□ -1.644e-8■■□□□ 11.9
DNMT1-220ENST00000589351 NUP214P35658 2090 aaPredicted RBP4.78□□□□□ -1.64
DNMT1-220ENST00000589351 AGAP5A6NIR3 686 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FAM90A7PA6NKC0 464 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SMIM23A6NLE4 172 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FAM90A22PA8MWA6 464 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FAM90A12PA8MX19 464 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FAM90A23PA8MXZ1 464 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 RPL36A-HNRNPH2H7BZ11 118 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 J3KTA2 159 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 RAB27BO00194 218 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 NR5A2O00482 541 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 OR2T1O43869 369 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 ENTPD5O75356 428 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SLC43A1O75387 559 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 VENTXO95231 258 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 AHSA1O95433 338 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 MPIG6BO95866 241 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 LGI1O95970 557 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 IGKV3-15P01624 115 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 IGLV1-44P01699 117 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 CHRNGP07510 517 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 MSMBP08118 114 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 TFPTP0C1Z6 253 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 CECR9P0C854 216 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 G6PDP11413 515 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 GABRB1P18505 474 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms