RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NABP1Q96AH0 204 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 PYURFQ96I23 114 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 FAM46AQ96IP4 442 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 NSMCE2Q96MF7 247 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 BEX2Q9BXY8 128 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 NDEL1Q9GZM8 345 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 NDE1Q9NXR1 346 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 TAAR3PQ9P1P4 343 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 GRHPRQ9UBQ7 328 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 KCNS2Q9ULS6 477 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 NAV3Q8IVL0 2385 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 TRBV4-1A0A0J9YWV2 114 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 CDC42EP2O14613 210 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 MGRN1O60291 552 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 LMX1BO60663 402 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 SNAP29O95721 258 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 CLPTM1O96005 669 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 IFNA2P01563 188 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 T-ENOLP0DO92 83 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 RHCEP18577 417 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 STOMP27105 288 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 LAP3P28838 519 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 CHN2P52757 468 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 UCP2P55851 309 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 KLF3P57682 345 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 FHL1Q13642 323 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 SEC23BQ15437 767 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 ZBED5Q49AG3 693 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 FAM166AQ6J272 317 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 CYP2R1Q6VVX0 501 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 ARIH2OSQ8N7S6 290 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 OR1J1Q8NGS3 322 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 AKR7LQ8NHP1 331 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 ZNF519Q8TB69 540 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 FNDC8Q8TC99 324 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 SNX33Q8WV41 574 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 C11orf40Q8WZ69 217 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 NMD3Q96D46 503 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 MSI2Q96DH6 328 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 SNX18Q96RF0 628 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 MDFIQ99750 246 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 BCL2L14Q9BZR8 327 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 SHARPINQ9H0F6 387 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 ANKRD19PQ9H560 264 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 GPR160Q9UJ42 338 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 CDC42EP3Q9UKI2 254 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 TMEM5Q9Y2B1 443 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 ADAM18Q9Y3Q7 739 aa10.9□□□□□ -0.66
NPLOC4-213ENST00000573519 A0A1W2PRQ8 180 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 C5orf49A4QMS7 147 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 XKRYO14609 159 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 TGFAP01135 160 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 HPXP02790 462 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 SEMG1P04279 462 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 GIFP27352 417 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 GDI2P50395 445 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 PSG4Q00888 419 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 GLO1Q04760 184 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 DGCR6Q14129 220 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 TRIP10Q15642 601 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 FAM27BQ5VT28 67 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 TMEM154Q6P9G4 183 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 IL17RELQ6ZVW7 336 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 TMPRSS11FQ6ZWK6 438 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 Q96M85 177 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 ZNF570Q96NI8 536 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 RERGLQ9H628 205 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 NARFLQ9H6Q4 476 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 KRCC1Q9NPI7 259 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 EIF3KQ9UBQ5 218 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 LPAR3Q9UBY5 353 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 AURKCQ9UQB9 309 aa10.89□□□□□ -0.67
NPLOC4-213ENST00000573519 TEX13CA0A0J9YWL9 993 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 TPD52L2O43399 206 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 CD14P08571 375 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 CST2P09228 141 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 ZNF26P17031 533 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 ATP6V1B2P21281 511 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 MSR1P21757 451 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 CALB2P22676 271 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 IGFBP5P24593 272 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 COL8A2P25067 703 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 GCH1P30793 250 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 IL2RGP31785 369 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 MAGEB1P43366 347 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 PCBD1P61457 104 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 SPIBQ01892 262 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 CHD3Q12873 2000 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 RIN1Q13671 783 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 CCNIQ14094 377 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 ELFN2Q5R3F8 820 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 SPATA46Q5T0L3 261 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 ARFGEF3Q5TH69 2177 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 CSPG4Q6UVK1 2322 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 ALDH16A1Q8IZ83 802 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 BCAS4Q8TDM0 211 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 RDH5Q92781 318 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 MCUR1Q96AQ8 359 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 RSRC1Q96IZ7 334 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 DHRS1Q96LJ7 313 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms