RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ALKBH1Q13686 389 aaKnown RBP12.26□□□□□ -0.45
TPM1-215ENST00000558868 ZNF829Q3KNS6 432 aaPredicted RBP12.26□□□□□ -0.45
TPM1-215ENST00000558868 LIPNQ5VXI9 398 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 CARD17Q5XLA6 110 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 ABLIM2Q6H8Q1 611 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 DEGS2Q6QHC5 323 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 TRILQ7L0X0 811 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.26□□□□□ -0.45
TPM1-215ENST00000558868 KRT77Q7Z794 578 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 CROCCP3Q8IVE0 287 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 TEX19Q8NA77 164 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 NEIL3Q8TAT5 605 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 RPS4Y2Q8TD47 263 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 AP3S1Q92572 193 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 NSMAFQ92636 917 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 THRSPQ92748 146 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 BORCS5Q969J3 196 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 ABTB1Q969K4 478 aaPredicted RBP12.26□□□□□ -0.45
TPM1-215ENST00000558868 TMEM54Q969K7 222 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 MCHR2Q969V1 340 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 SLC25A46Q96AG3 418 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 PGLYRP3Q96LB9 341 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 OR2M2Q96R28 347 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 UCN2Q96RP3 112 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 GLTPQ9NZD2 209 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 ZNF281Q9Y2X9 895 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 GRIP1Q9Y3R0 1128 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 KCNMB2Q9Y691 235 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 PMF1-BGLAPU3KQ54 211 aa12.26□□□□□ -0.45
TPM1-215ENST00000558868 NBEAQ8NFP9 2946 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 IGHV3-15A0A0B4J1V0 119 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 A0A1W2PPL8 197 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 CLDN25C9JDP6 229 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 GPR171O14626 319 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 CASKO14936 926 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 MAGEB4O15481 346 aaPredicted RBP12.25□□□□□ -0.45
TPM1-215ENST00000558868 KLK10O43240 276 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 CYTIPO60759 359 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 SLC43A1O75387 559 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 UPK3AO75631 287 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 ARL6IP5O75915 188 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 ABHD16AO95870 558 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 QDPRP09417 244 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 INHBBP09529 407 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 ZNF708P17019 499 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 CFL1P23528 166 aaKnown RBP12.25□□□□□ -0.45
TPM1-215ENST00000558868 MYL9P24844 172 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 SDC2P34741 201 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 PSMB10P40306 273 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 RFC3P40938 356 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 LHX2P50458 406 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 ZNF84P51523 738 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 ZNF133P52736 654 aaPredicted RBP12.25□□□□□ -0.45
TPM1-215ENST00000558868 RIDAP52758 137 aaKnown RBP12.25□□□□□ -0.45
TPM1-215ENST00000558868 CLDN15P56746 228 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 RASGEF1BQ0VAM2 473 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 KCNMB1Q16558 191 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 MEP1BQ16820 701 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 ACSM3Q53FZ2 586 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 YIF1BQ5BJH7 314 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 C10orf128Q5T292 105 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 FDX2Q6P4F2 183 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 RPTNQ6XPR3 784 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 TMEM91Q6ZNR0 172 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 FCRLAQ7L513 359 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 CEACAM19Q7Z692 300 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.25□□□□□ -0.45
TPM1-215ENST00000558868 TPRA1Q86W33 373 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 OR52N5Q8NH56 324 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 C11orf40Q8WZ69 217 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 FOXN4Q96NZ1 517 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 ABHD6Q9BV23 337 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 C6orf62Q9GZU0 229 aaPredicted RBP12.25□□□□□ -0.45
TPM1-215ENST00000558868 COMMD4Q9H0A8 199 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 SLC6A15Q9H2J7 730 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 LDAHQ9H6V9 325 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 ELOVL3Q9HB03 270 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 B3GAT2Q9NPZ5 323 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 SLCO1C1Q9NYB5 712 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 KLK13Q9UKR3 277 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 MCTS1Q9ULC4 181 aaKnown RBP12.25□□□□□ -0.45
TPM1-215ENST00000558868 MED13Q9UHV7 2174 aa12.25□□□□□ -0.45
TPM1-215ENST00000558868 CNOT1A5YKK6 2376 aaKnown RBP12.25□□□□□ -0.45
TPM1-215ENST00000558868 IQCMA0A1B0GVH7 501 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 TMEM212A6NML5 194 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 H0YC42 278 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 EFSO43281 561 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 SC5DO75845 299 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 RPP14O95059 124 aaKnown RBP12.24□□□□□ -0.45
TPM1-215ENST00000558868 KLK2P20151 261 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 MAPK3P27361 379 aaPredicted RBP12.24□□□□□ -0.45
TPM1-215ENST00000558868 OPRL1P41146 370 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 CCR9P51686 369 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 BMXP51813 675 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 CLDN18P56856 261 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 CHMP1BQ7LBR1 199 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 WDFY1Q8IWB7 410 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 C20orf196Q8IYI0 205 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 TMEM123Q8N131 208 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 ZADH2Q8N4Q0 377 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms