RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 KCTD9Q7L273 389 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 NUP54Q7Z3B4 507 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNF440Q8IYI8 595 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNF101Q8IZC7 436 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 STT3BQ8TCJ2 826 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 SFXN2Q96NB2 322 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 OR6C1Q96RD1 312 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 EMC7Q9NPA0 242 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 DUX1O43812 170 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 DDAH2O95865 285 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 F10P00742 488 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 PLATP00750 562 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 ASAH2BP0C7U1 165 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 CD27P26842 260 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC35D3Q5M8T2 416 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 OR13C9Q8NGT0 318 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 FAM71F1Q96KD3 344 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 JAM3Q9BX67 310 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 TINAGL1Q9GZM7 467 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 AKIRIN1Q9H9L7 192 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 GPN1Q9HCN4 374 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 TRAV36DV7A0A075B6V5 113 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 TRBV11-1A0A0K0K1C0 115 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 LGALS8O00214 317 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 H2BFMP0C1H6 154 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 CDNFQ49AH0 187 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC22A6Q4U2R8 563 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 FAM69AQ5T7M9 428 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 OR52W1Q6IF63 320 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 GALNTL5Q7Z4T8 443 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNF721Q8TF20 911 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 FAM131CQ96AQ9 280 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 FGGYQ96C11 551 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 HAVCR1Q96D42 359 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 CYYR1Q96J86 154 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC6A7Q99884 636 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 METTL7AQ9H8H3 244 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 COPZ2Q9P299 210 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 SPEF1Q9Y4P9 236 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 LRP12Q9Y561 859 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 DNAJC13O75165 2243 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 TRIM3O75382 744 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 GIMD1P0DJR0 217 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 RPL27P61353 136 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 GLO1Q04760 184 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 METTL11BQ5VVY1 283 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 CMIPQ8IY22 773 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 OTOSQ8NHW6 89 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 C4orf45Q96LM5 186 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 TTYH1Q9H313 450 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 UBQLN2Q9UHD9 624 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 STEAP1Q9UHE8 339 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 TMEM14AQ9Y6G1 99 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 IGKV1D-43A0A0B4J1Z2 117 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 TNFRSF10AO00220 468 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 CD53P19397 219 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 CSF2RBP32927 897 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 BIDP55957 195 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 CFHR1Q03591 330 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 RIN1Q13671 783 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 OPCMLQ14982 345 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 ELAVL1Q15717 326 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 PLXDC1Q8IUK5 500 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 GVQW1Q8N7I0 195 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 MIB2Q96AX9 1013 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 NMNAT2Q9BZQ4 307 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 VSX1Q9NZR4 365 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 SCP2D1Q9UJQ7 156 aa12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 NOP16Q9Y3C1 178 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-209ENST00000548825 IGHV1OR21-1A0A087WYE8 117 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 C7orf66A4D0T2 115 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 LEUTXA8MZ59 168 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 ECDO95905 644 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 IFNA7P01567 189 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 FAUP35544 74 aaKnown RBP12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 CCR5P51681 352 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 LPAL2Q16609 132 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 DCAF12L2Q5VW00 463 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 IDO2Q6ZQW0 420 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 CDC20BQ86Y33 519 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 ADGRG3Q86Y34 549 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC38A9Q8NBW4 561 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 RELL2Q8NC24 303 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 NUDCD2Q8WVJ2 157 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 OR5B2Q96R09 309 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 GPER1Q99527 375 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 NARFLQ9H6Q4 476 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 C13orf42A0A1B0GVH6 325 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 TMEM212A6NML5 194 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 METTL12A8MUP2 240 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 TIAF1O95411 115 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 RAB3DO95716 219 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 FASLGP48023 281 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 RPS4XP62701 263 aaKnown RBP12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC17A1Q14916 467 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 KCTD18Q6PI47 426 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 COX15Q7KZN9 410 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 RTN4RL2Q86UN3 420 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms