RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 RGRP47804 291 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 RFX2P48378 723 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 PXNP49023 591 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 DIO1P49895 249 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 GNG10P50151 68 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 GLYATL3Q5SZD4 288 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 PRAMEF20Q5VT98 475 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 NAXDQ8IW45 347 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 KIRREL1Q96J84 757 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 LCORQ96JN0 433 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 OR5M11Q96RB7 305 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 GINS3Q9BRX5 216 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 CALHM2Q9HA72 323 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 PLSCR3Q9NRY6 295 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 MIOXQ9UGB7 285 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 RNF24Q9Y225 148 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 PPP5D1E7EU14 171 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 SYT5O00445 386 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 EIF1BO60739 113 aaKnown RBP9.15□□□□□ -0.94
COL4A6-208ENST00000538570 DEFA4P12838 97 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 FCER1GP30273 86 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 CXCL12P48061 93 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 SLC6A11P48066 632 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 CCR9P51686 369 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 CARD18P57730 90 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.15□□□□□ -0.94
COL4A6-208ENST00000538570 PET117Q6UWS5 81 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 GDF7Q7Z4P5 450 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 TMEFF1Q8IYR6 380 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 LINC00469Q8N7U9 141 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 ELF4Q99607 663 aaPredicted RBP9.15□□□□□ -0.94
COL4A6-208ENST00000538570 SLC46A2Q9BY10 475 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM231Q9H6L2 316 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 V9GYS6 101 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 BAZ2AQ9UIF9 1905 aaKnown RBP9.15□□□□□ -0.94
COL4A6-208ENST00000538570 MYO10Q9HD67 2058 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 TRABD2BA6NFA1 517 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 SEC14L6B5MCN3 397 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 HCRTR1O43613 425 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 FPR3P25089 353 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 GABRA4P48169 554 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 UBE2IP63279 158 aaKnown RBP9.15□□□□□ -0.94
COL4A6-208ENST00000538570 PHLDA2Q53GA4 152 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 DCAF12Q5T6F0 453 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF680Q8NEM1 530 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 H1FXQ92522 213 aaKnown RBP9.15□□□□□ -0.94
COL4A6-208ENST00000538570 A0A1B0GWA3 101 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 ACAA2P42765 397 aaKnown RBP9.15□□□□□ -0.94
COL4A6-208ENST00000538570 NOVP48745 357 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 YPEL5P62699 121 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 SYT13Q7L8C5 426 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 SUMF1Q8NBK3 374 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 OR51A4Q8NGJ6 313 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 NEURL3Q96EH8 262 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 SMIM14Q96QK8 99 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 PLEKHF2Q9H8W4 249 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 SPACA1Q9HBV2 294 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 CSNK1G1Q9HCP0 422 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 A0A1W2PPH5 198 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 DCTN6O00399 190 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 SIGLEC6O43699 453 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 CST2P09228 141 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 ACKR3P25106 362 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 POLR2IP36954 125 aaKnown RBP9.15□□□□□ -0.94
COL4A6-208ENST00000538570 RBP2P50120 134 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 NPY4RP50391 375 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 CDC20Q12834 499 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 MEP1BQ16820 701 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 LDLRAD1Q5T700 205 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 LINC00299Q6ZSB3 139 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 PRSS35Q8N3Z0 413 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 OR2G3Q8NGZ4 309 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 FBXW5Q969U6 566 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 FAM122AQ96E09 287 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 CXorf36Q9H7Y0 433 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 PRSS16Q9NQE7 514 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF331Q9NQX6 463 aaPredicted RBP9.15□□□□□ -0.94
COL4A6-208ENST00000538570 CORINQ9Y5Q5 1042 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 NUMBLQ9Y6R0 609 aa9.15□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF142P52746 1687 aaPredicted RBP9.15□□□□□ -0.95
COL4A6-208ENST00000538570 UMAD1C9J7I0 102 aa9.15□□□□□ -0.95
COL4A6-208ENST00000538570 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.95
COL4A6-208ENST00000538570 AKR7A3O95154 331 aa9.15□□□□□ -0.95
COL4A6-208ENST00000538570 IGFBP1P08833 259 aaPredicted RBP9.15□□□□□ -0.95
COL4A6-208ENST00000538570 DCDP81605 110 aaKnown RBP9.15□□□□□ -0.95
COL4A6-208ENST00000538570 MED25Q71SY5 747 aa9.15□□□□□ -0.95
COL4A6-208ENST00000538570 SHARPINQ9H0F6 387 aa9.15□□□□□ -0.95
COL4A6-208ENST00000538570 SPNS1Q9H2V7 528 aa9.15□□□□□ -0.95
COL4A6-208ENST00000538570 PRDM7Q9NQW5 492 aa9.15□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF586Q9NXT0 402 aa9.15□□□□□ -0.95
COL4A6-208ENST00000538570 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.15□□□□□ -0.95
COL4A6-208ENST00000538570 K7ERU9 68 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 SMIM6P0DI80 62 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TBPP20226 339 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TACR1P25103 407 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 RAC1P63000 192 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 ASAH1Q13510 395 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 SYT6Q5T7P8 510 aaPredicted RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 GLIPR1L1Q6UWM5 242 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 CPEB2Q7Z5Q1 589 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms