RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZNF544Q6NX49 715 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 ALDH16A1Q8IZ83 802 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 PARP8Q8N3A8 854 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 SDR9C7Q8NEX9 313 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 OR1J2Q8NGS2 313 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 OR2T4Q8NH00 348 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 MBD6Q96DN6 1003 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 ZNF75AQ96N20 296 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 DHRS9Q9BPW9 319 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 GABARAPL1Q9H0R8 117 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 RPRD1BQ9NQG5 326 aaKnown RBP13.03□□□□□ -0.32
RNF4-210ENST00000508235 B9D1Q9UPM9 204 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 COA3Q9Y2R0 106 aaPredicted RBP13.03□□□□□ -0.32
RNF4-210ENST00000508235 TIMM10BQ9Y5J6 103 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 OR6C68A6NDL8 312 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 HMGN1P05114 100 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 CELA3BP08861 270 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 MMP7P09237 267 aaPredicted RBP13.02□□□□□ -0.33
RNF4-210ENST00000508235 PATE4P0C8F1 98 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 CD53P19397 219 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 POU1F1P28069 291 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 CENPAP49450 140 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 RAB39AQ14964 217 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 TBC1D28Q2M2D7 210 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 PGGHGQ32M88 737 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 AGAP6Q5VW22 663 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 ZBTB46Q86UZ6 589 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 OR6V1Q8N148 313 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 FBXL14Q8N1E6 418 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 NPEPL1Q8NDH3 523 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 NUP37Q8NFH4 326 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 OR4Q3Q8NH05 313 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 FGFBP3Q8TAT2 258 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 SMAP2Q8WU79 429 aaPredicted RBP13.02□□□□□ -0.33
RNF4-210ENST00000508235 TMEM171Q8WVE6 324 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 HTRA1Q92743 480 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 STMN2Q93045 179 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 SEMA6AQ9H2E6 1030 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 NOX3Q9HBY0 568 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 SRA1Q9HD15 236 aaKnown RBP13.02□□□□□ -0.33
RNF4-210ENST00000508235 KRT84Q9NSB2 600 aa13.02□□□□□ -0.33
RNF4-210ENST00000508235 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
RNF4-210ENST00000508235 CADP27708 2225 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 SETXQ7Z333 2677 aaKnown RBP13.01□□□□□ -0.33
RNF4-210ENST00000508235 IGLV1-36A0A0B4J1U3 117 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 IGHV2OR16-5A0A0B4J2B6 119 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 E7EQL1 145 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 IGFBP1P08833 259 aaPredicted RBP13.01□□□□□ -0.33
RNF4-210ENST00000508235 ZNF32P17041 273 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 PAICSP22234 425 aaKnown RBP13.01□□□□□ -0.33
RNF4-210ENST00000508235 APOBEC3AP31941 199 aaPredicted RBP13.01□□□□□ -0.33
RNF4-210ENST00000508235 APLNRP35414 380 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 FABP6P51161 128 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 DAPP51397 102 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 BLVRAP53004 296 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 ESRRGP62508 458 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 GALK2Q01415 458 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 SCRN3Q0VDG4 424 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 AQP6Q13520 282 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 ENDOGQ14249 297 aaKnown RBP13.01□□□□□ -0.33
RNF4-210ENST00000508235 KCNMB1Q16558 191 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 PABPC1L2AQ5JQF8 200 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 SLC37A3Q8NCC5 494 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 SLC30A7Q8NEW0 376 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 NEUROG1Q92886 237 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 FBXO17Q96EF6 278 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 MS4A3Q96HJ5 214 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 TSSK2Q96PF2 358 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 ZNF416Q9BWM5 594 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 PRRG3Q9BZD7 231 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 GRIP2Q9C0E4 1043 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 CXorf56Q9H5V9 222 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 CDH20Q9HBT6 801 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 S100A14Q9HCY8 104 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 CMC2Q9NRP2 79 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 POLR1DQ9Y2S0 133 aa13.01□□□□□ -0.33
RNF4-210ENST00000508235 DCHS2Q6V1P9 2916 aa13□□□□□ -0.33
RNF4-210ENST00000508235 H3BNX3 289 aa13□□□□□ -0.33
RNF4-210ENST00000508235 HLA-DQA2P01906 255 aa13□□□□□ -0.33
RNF4-210ENST00000508235 BMP4P12644 408 aa13□□□□□ -0.33
RNF4-210ENST00000508235 ZNF35P13682 527 aa13□□□□□ -0.33
RNF4-210ENST00000508235 CALCRP30988 508 aa13□□□□□ -0.33
RNF4-210ENST00000508235 TTKP33981 857 aa13□□□□□ -0.33
RNF4-210ENST00000508235 SLC25A1P53007 311 aa13□□□□□ -0.33
RNF4-210ENST00000508235 CRISP1P54107 249 aa13□□□□□ -0.33
RNF4-210ENST00000508235 CDK5Q00535 292 aa13□□□□□ -0.33
RNF4-210ENST00000508235 PSG4Q00888 419 aa13□□□□□ -0.33
RNF4-210ENST00000508235 GINS1Q14691 196 aa13□□□□□ -0.33
RNF4-210ENST00000508235 DEFB113Q30KQ7 82 aa13□□□□□ -0.33
RNF4-210ENST00000508235 ZNF362Q5T0B9 420 aaPredicted RBP13□□□□□ -0.33
RNF4-210ENST00000508235 UNQ6126/PRO20091Q6UXV3 157 aa13□□□□□ -0.33
RNF4-210ENST00000508235 MYPOPQ86VE0 399 aaPredicted RBP13□□□□□ -0.33
RNF4-210ENST00000508235 ZNF584Q8IVC4 421 aa13□□□□□ -0.33
RNF4-210ENST00000508235 CYB561A3Q8NBI2 242 aa13□□□□□ -0.33
RNF4-210ENST00000508235 ICA1LQ8NDH6 482 aa13□□□□□ -0.33
RNF4-210ENST00000508235 PROKR2Q8NFJ6 384 aa13□□□□□ -0.33
RNF4-210ENST00000508235 OR10H5Q8NGA6 315 aa13□□□□□ -0.33
RNF4-210ENST00000508235 PLEKHA8Q96JA3 519 aa13□□□□□ -0.33
RNF4-210ENST00000508235 DDOQ99489 341 aa13□□□□□ -0.33
RNF4-210ENST00000508235 FOXC2Q99958 501 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms