RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 DOCK2Q92608 1830 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SCN7AQ01118 1682 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 TMEM2Q9UHN6 1383 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 PAPPAQ13219 1627 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 LOC100653049A0A140TA62 436 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 TCRBV9S1A1TA0A576 114 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 DHRS12A0PJE2 317 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CCDC182A6NF36 153 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MFSD2BA6NFX1 497 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 OR6C70A6NIJ9 312 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 FAM159BA6NKW6 160 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF729A6NN14 1252 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 TRIM49D1C9J1S8 452 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 EI24O14681 340 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 AIM2O14862 343 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 RGS5O15539 181 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 RAD1O60671 282 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 SCGB2A1O75556 95 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CRTAPO75718 401 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 KRT34O76011 436 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CCNB2O95067 398 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 NUDT14O95848 222 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 DHFRP00374 187 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 IFNGP01579 166 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 HLA-DQB1P01920 261 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 FBP1P09467 338 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CLUP10909 449 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 POU2F1P14859 743 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF250P15622 560 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 NELFEP18615 380 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 BCL3P20749 454 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CALCRP30988 508 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MAT2AP31153 395 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 NUP62P37198 522 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MAGEA12P43365 314 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 RPL34P49207 117 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MRPL19P49406 292 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ERFP50548 548 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 SNAP25P60880 206 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 SPCS3P61009 180 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 SNRPFP62306 86 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 STX4Q12846 297 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MAB21L1Q13394 359 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 PEX6Q13608 980 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 DMC1Q14565 340 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MXD4Q14582 209 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ABRAXAS2Q15018 415 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ZSWIM7Q19AV6 140 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 RFX4Q33E94 735 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ANKRD55Q3KP44 614 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF528Q3MIS6 628 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 BCL7AQ4VC05 210 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 AADACL4Q5VUY2 407 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MLIPQ5VWP3 458 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 WDR25Q64LD2 544 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 C3orf33Q6P1S2 294 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 PGAP1Q75T13 922 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 HSD17B13Q7Z5P4 300 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 COMMD7Q86VX2 200 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 DHFR2Q86XF0 187 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 C8orf59Q8N0T1 100 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 STPG2Q8N412 459 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 FGFRL1Q8N441 504 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ARL14Q8N4G2 192 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 TTC29Q8NA56 475 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 DUSP18Q8NEJ0 188 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 OR1M1Q8NGA1 313 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF461Q8TAF7 563 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 RORBQ92753 470 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC38A4Q969I6 547 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CPNE4Q96A23 557 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 RCN3Q96D15 328 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MSANTD3Q96H12 275 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 C1orf147Q96MC9 270 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 OR52B2Q96RD2 323 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 SDHCQ99643 169 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 TBCDQ9BTW9 1192 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 GPR174Q9BXC1 333 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 GSDMCQ9BYG8 508 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 NLNQ9BYT8 704 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 REG4Q9BYZ8 158 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 BCL2L14Q9BZR8 327 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ALX4Q9H161 411 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 RANBP3Q9H6Z4 567 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CYP3A43Q9HB55 503 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MRPS30Q9NP92 439 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ACP6Q9NPH0 428 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 POLE4Q9NR33 117 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CUTCQ9NTM9 273 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 UFSP2Q9NUQ7 469 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 FAM49BQ9NUQ9 324 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 MCUBQ9NWR8 336 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 BABAM2Q9NXR7 383 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 COX16Q9P0S2 106 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF581Q9P0T4 197 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CTSFQ9UBX1 484 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 WARS2Q9UGM6 360 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 PURGQ9UJV8 347 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 TBC1D24Q9ULP9 559 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 BAIAP2Q9UQB8 552 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms