RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	PRSS50	Q9UI38	385 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	ANK3	Q12955	4377 aa	Known RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR6C68	A6NDL8	312 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR6C65	A6NJZ3	312 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	CENPBD1	B2RD01	187 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	PRR23D1	E9PI22	279 aa	Predicted RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	UPK3A	O75631	287 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	QDPR	P09417	244 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	GNAO1	P09471	354 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	PSMB1	P20618	241 aa	Known RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	PAICS	P22234	425 aa	Known RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	NR1H2	P55055	460 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	FMOD	Q06828	376 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	DBP	Q10586	325 aa	Predicted RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	BEX5	Q5H9J7	111 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	PHYHD1	Q5SRE7	291 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZNF691	Q5VV52	312 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	PLBD1	Q6P4A8	553 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	SEZ6L2	Q6UXD5	910 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	CXXC5	Q7LFL8	322 aa	Known RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	SSX8	Q7RTT4	187 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	CPO	Q8IVL8	374 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	POMGNT2	Q8NAT1	580 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	SETD9	Q8NE22	299 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR9Q1	Q8NGQ5	310 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	TMEM163	Q8TC26	289 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	PIGT	Q969N2	578 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	MUS81	Q96NY9	551 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	SNX18	Q96RF0	628 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	ULBP2	Q9BZM5	246 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	SYT4	Q9H2B2	425 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	SRA1	Q9HD15	236 aa	Known RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	NGB	Q9NPG2	151 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	RPRD1B	Q9NQG5	326 aa	Known RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC7A10	Q9NS82	523 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	ASB6	Q9NWX5	421 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	GLTP	Q9NZD2	209 aa		11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	VSX1	Q9NZR4	365 aa	Predicted RBP	11.46	□□□□□ -0.57
NR1H3-223	ENST00000486991	HEATR1	Q9H583	2144 aa	Known RBP	11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	INAFM1	C9JVW0	142 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	AHCYL1	O43865	530 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	SLC16A7	O60669	478 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	NR2C1	P13056	603 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	CENPA	P49450	140 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	FAP	Q12884	760 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	IL18R1	Q13478	541 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	THEM4	Q5T1C6	240 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	DNM1P34	Q6PK57	102 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	ENTHD1	Q8IYW4	607 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	OR8J1	Q8NGP2	316 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	FNDC8	Q8TC99	324 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	TRUB1	Q8WWH5	349 aa	Known RBP	11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	NSMAF	Q92636	917 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	MCHR2	Q969V1	340 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	LRR1	Q96L50	414 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	TSSK2	Q96PF2	358 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	DDO	Q99489	341 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	HCAR1	Q9BXC0	346 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	LINC00470	Q9BZP3	86 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	NUAK2	Q9H093	628 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991		Q9H521	79 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	HINT3	Q9NQE9	182 aa	Known RBP	11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	AASS	Q9UDR5	926 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	RAB26	Q9ULW5	256 aa		11.45	□□□□□ -0.58
NR1H3-223	ENST00000486991	FAM171A2	A8MVW0	826 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	ZNF587B	E7ETH6	402 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	GYPB	P06028	91 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	CLU	P10909	449 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	CTLA4	P16410	223 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	IL32	P24001	234 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	CRABP1	P29762	137 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	EFNB1	P98172	346 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	ROR2	Q01974	943 aa	Known RBP	11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	P2RY6	Q15077	328 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	HIST3H3	Q16695	136 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	KLHL12	Q53G59	568 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	C9orf135	Q5VTT2	229 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	FBXW9	Q5XUX1	488 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	LRFN4	Q6PJG9	635 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	C20orf204	Q6ZNR8	217 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	USP51	Q70EK9	711 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	LINGO2	Q7L985	606 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	BBS1	Q8NFJ9	593 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	NMD3	Q96D46	503 aa	Known RBP	11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	CNBD2	Q96M20	576 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	FOXN4	Q96NZ1	517 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	CCL19	Q99731	98 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	ACTR6	Q9GZN1	396 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	OR51V1	Q9H2C8	321 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	CRLF2	Q9HC73	371 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	GPR35	Q9HC97	309 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	DNAJC27	Q9NZQ0	273 aa		11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.44	□□□□□ -0.58
NR1H3-223	ENST00000486991	IGKV1D-43	A0A0B4J1Z2	117 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991		A0A1W2PPL8	197 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms