RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 FBXO46Q6PJ61 603 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 TMEM184AQ6ZMB5 413 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 SLC35D2Q76EJ3 337 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 ZNF627Q7L945 461 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 PM20D2Q8IYS1 436 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 ELSPBP1Q96BH3 223 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 SEC22AQ96IW7 307 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 SLC41A2Q96JW4 573 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 OR8B4Q96RC9 309 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 MNTQ99583 582 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 CCDC3Q9BQI4 270 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 ZMAT3Q9HA38 289 aaKnown RBP11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 HRASLS2Q9NWW9 162 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 TMEM14AQ9Y6G1 99 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 A0A0A6YYC8 382 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 I3L1I5 382 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 SIGLEC6O43699 453 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 SLC25A12O75746 678 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 OR2F2O95006 317 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 HOXC4P09017 264 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 SLC25A4P12235 298 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 ZNF28P17035 718 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 CD34P28906 385 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 FGL1Q08830 312 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 SKP2Q13309 424 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 OR2F1Q13607 317 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 SLC17A1Q14916 467 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 ATXN7L3Q14CW9 347 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 TAF13Q15543 124 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 EMC4Q5J8M3 183 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 C7orf61Q8IZ16 206 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 ZSCAN1Q8NBB4 408 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 OR5T2Q8NGG2 359 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 DNAJA3Q96EY1 480 aa11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 NARS2Q96I59 477 aaKnown RBP11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-205ENST00000466780 TTLL8A6PVC2 850 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 K7EQS6 105 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 SULT1C2O00338 296 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 DOK2O60496 412 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 APBB3O95704 486 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 RENP00797 406 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 PBX2P40425 430 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 ATP1B3P54709 279 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 TOMM20Q15388 145 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 MOGAT2Q3SYC2 334 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 TMEM225Q6GV28 225 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 ZNF440Q8IYI8 595 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 FAM174AQ8TBP5 190 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 SLC6A7Q99884 636 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 OBP2AQ9NY56 170 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 MSRAQ9UJ68 235 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 KLK13Q9UKR3 277 aa11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 MRPS18BQ9Y676 258 aaKnown RBP11.71□□□□□ -0.53
PDZRN3-205ENST00000466780 HSPB2A8KAH6 182 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 GPR31O00270 319 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 ATG12O94817 140 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 CD74P04233 296 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 H2AFB1P0C5Y9 115 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 MFGE8Q08431 387 aaPredicted RBP11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 HSPB2Q16082 182 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 TMEM196Q5HYL7 178 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 GLYATL3Q5SZD4 288 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF761Q86XN6 746 aaPredicted RBP11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 BPIFB2Q8N4F0 458 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 OR1S2Q8NGQ3 325 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 PPP1R1CQ8WVI7 109 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 TAAR8Q969N4 342 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 CCNL2Q96S94 520 aaPredicted RBP11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 OR10A5Q9H207 317 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 TAS2R4Q9NYW5 299 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 MYEF2Q9P2K5 600 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 CGGBP1Q9UFW8 167 aaPredicted RBP11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 PCDHB10Q9UN67 800 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 GTF2A1LQ9UNN4 478 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 VSIG4Q9Y279 399 aa11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 FARSAQ9Y285 508 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 NOP16Q9Y3C1 178 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-205ENST00000466780 A0A1W2PPC1 479 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 DLSTP36957 453 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 UBE2IP63279 158 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 IGLV3-21P80748 117 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 SNTB1Q13884 538 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 ALG11Q2TAA5 492 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 SCGB2B2Q4G0G5 96 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 PAN3Q58A45 887 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 LIN54Q6MZP7 749 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 NDUFAF7Q7L592 441 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 PHYHIPLQ96FC7 376 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 SCPEP1Q9HB40 452 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF736B4DX44 427 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 SULT2B1O00204 365 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 HLA-AP01891 365 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 CSN2P05814 226 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 COL9A1P20849 921 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 MAOAP21397 527 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 HTR2CP28335 458 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 BDKRB2P30411 391 aa11.7□□□□□ -0.54
PDZRN3-205ENST00000466780 CAPZA1P52907 286 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms