RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 OR52L1Q8NGH7 329 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 SAMD8Q96LT4 415 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 ERMAPQ96PL5 475 aaPredicted RBP11.15□□□□□ -0.62
COL5A1-206ENST00000465877 IFT27Q9BW83 186 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 CHID1Q9BWS9 393 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 PLA2G12AQ9BZM1 189 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 KCNN2Q9H2S1 579 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 EGLN3Q9H6Z9 239 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 POLE4Q9NR33 117 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 MTORP42345 2549 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 NSD1Q96L73 2696 aaPredicted RBP11.15□□□□□ -0.62
COL5A1-206ENST00000465877 IQCMA0A1B0GVH7 501 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 TRIM64A6NGJ6 449 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 TRIM64BA6NI03 449 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 B9A039 149 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 ARPC3O15145 178 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 SNAP29O95721 258 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 CST2P09228 141 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 OR4A8P0C604 315 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 BMP4P12644 408 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 NR4A1P22736 598 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 APEX1P27695 318 aaKnown RBP11.14□□□□□ -0.63
COL5A1-206ENST00000465877 SERPINF1P36955 418 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 GUCA1AP43080 201 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-206ENST00000465877 ERFP50548 548 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 RPS23P62266 143 aaKnown RBP11.14□□□□□ -0.63
COL5A1-206ENST00000465877 SWI5Q1ZZU3 235 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 MICAQ29983 383 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 TBC1D28Q2M2D7 210 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 PABPC1L2AQ5JQF8 200 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 CLEC12AQ5QGZ9 265 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 FAM27BQ5VT28 67 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 LEG1Q6P5S2 330 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 JAZF1Q86VZ6 243 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 PAQR4Q8N4S7 273 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-206ENST00000465877 SDR9C7Q8NEX9 313 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 OR10G2Q8NGC3 310 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 OR8D4Q8NGM9 314 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 FOXN4Q96NZ1 517 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 SNX18Q96RF0 628 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 ZNF416Q9BWM5 594 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 LRMDAQ9H2I8 198 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 RERGLQ9H628 205 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 BARX1Q9HBU1 254 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-206ENST00000465877 EMC7Q9NPA0 242 aa11.14□□□□□ -0.63
COL5A1-206ENST00000465877 ARRDC5A6NEK1 342 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 SLC16A7O60669 478 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 FKBP6O75344 327 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 SOX14O95416 240 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 PTHP01270 115 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 GASTP01350 101 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 CCL2P13500 99 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 HIST1H1CP16403 213 aaKnown RBP11.13□□□□□ -0.63
COL5A1-206ENST00000465877 NOS3P29474 1203 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 APLNRP35414 380 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 CDKN2AP42771 156 aaKnown RBP11.13□□□□□ -0.63
COL5A1-206ENST00000465877 NUDT6P53370 316 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 CBX1P83916 185 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 PLP2Q04941 152 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 ENDOGQ14249 297 aaKnown RBP11.13□□□□□ -0.63
COL5A1-206ENST00000465877 CLEC12BQ2HXU8 276 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 MST1LQ2TV78 715 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 DNM1P34Q6PK57 102 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 UGT2A3Q6UWM9 527 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 RASSF6Q6ZTQ3 369 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 SVOPLQ8N434 492 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 AKR7LQ8NHP1 331 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 COX4I2Q96KJ9 171 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 NMNAT3Q96T66 252 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 DGCR6LQ9BY27 220 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 OR2H1Q9GZK4 316 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 NUAK2Q9H093 628 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 FN3KQ9H479 309 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 PLK3Q9H4B4 646 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 YY1AP1Q9H869 796 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 CDH20Q9HBT6 801 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 TBC1D23Q9NUY8 699 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 IL20Q9NYY1 176 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 SPEF1Q9Y4P9 236 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 PMF1-BGLAPU3KQ54 211 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 NF1P21359 2839 aa11.13□□□□□ -0.63
COL5A1-206ENST00000465877 ZFHX3Q15911 3703 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 IGLV1-36A0A0B4J1U3 117 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 C12orf71A8MTZ7 269 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 H7C1Q1 480 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 DCTN6O00399 190 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 BHLHE40O14503 412 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 GNGT2O14610 69 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 E2F6O75461 281 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 KHDRBS3O75525 346 aaKnown RBP11.12□□□□□ -0.63
COL5A1-206ENST00000465877 RENP00797 406 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 SCG5P05408 212 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 FAM157BP0CG42 384 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 GAAP10253 952 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 GSTM3P21266 225 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 GLRXP35754 106 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 PPOXP50336 477 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 PCBD1P61457 104 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 PSG4Q00888 419 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 SCRN3Q0VDG4 424 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms