RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 WNT5AP41221 380 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 NUDT2P50583 147 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 ERVK-25P63136 954 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 CR1LQ2VPA4 569 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 TMEM255AQ5JRV8 349 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 ZNF730Q6ZMV8 503 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 TMPRSS11FQ6ZWK6 438 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 ZNF101Q8IZC7 436 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 GTF3AQ92664 365 aaKnown RBP17.73■□□□□ 0.43
SDC1-205ENST00000447124 BCL2L14Q9BZR8 327 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 RACGAP1Q9H0H5 632 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 WNT5BQ9H1J7 359 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 NMNAT1Q9HAN9 279 aaPredicted RBP17.73■□□□□ 0.43
SDC1-205ENST00000447124 CCNB1IP1Q9NPC3 277 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 HINT3Q9NQE9 182 aaKnown RBP17.73■□□□□ 0.43
SDC1-205ENST00000447124 ENPP4Q9Y6X5 453 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 PTP4A3O75365 173 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 RP2O75695 350 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 ACHEP22303 614 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 GPR4P46093 362 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 GPR6P46095 362 aaPredicted RBP17.72■□□□□ 0.43
SDC1-205ENST00000447124 SLC9A3P48764 834 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 CDH15P55291 814 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 TMEM33P57088 247 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 KLF3P57682 345 aaPredicted RBP17.72■□□□□ 0.43
SDC1-205ENST00000447124 CCNIQ14094 377 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 NKPD1Q17RQ9 610 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 ANKDD1AQ495B1 522 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 LINC01356Q8N9X3 169 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 ICA1LQ8NDH6 482 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 OR1J1Q8NGS3 322 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 SLC7A13Q8TCU3 470 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 FAM162AQ96A26 154 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 KCTD14Q9BQ13 255 aaPredicted RBP17.72■□□□□ 0.43
SDC1-205ENST00000447124 OR2H1Q9GZK4 316 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 ZNF275Q9NSD4 429 aaPredicted RBP17.72■□□□□ 0.43
SDC1-205ENST00000447124 EGFL7Q9UHF1 273 aa17.72■□□□□ 0.43
SDC1-205ENST00000447124 H7C1C5 153 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 CST2P09228 141 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 SRD5A1P18405 259 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 THBS2P35442 1172 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 SELENOVP59797 346 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 LCN6P62502 163 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 MRPS11P82912 194 aaKnown RBP17.71■□□□□ 0.43
SDC1-205ENST00000447124 SRSF2Q01130 221 aaKnown RBP17.71■□□□□ 0.43
SDC1-205ENST00000447124 ENDOGQ14249 297 aaKnown RBP17.71■□□□□ 0.43
SDC1-205ENST00000447124 ZBED5Q49AG3 693 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 GLYATQ6IB77 296 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 UGT2A3Q6UWM9 527 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 CLDND2Q8NHS1 167 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 FNDC8Q8TC99 324 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 MARS2Q96GW9 593 aaKnown RBP17.71■□□□□ 0.43
SDC1-205ENST00000447124 Q96M85 177 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 SLCO1C1Q9NYB5 712 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 ADAM18Q9Y3Q7 739 aa17.71■□□□□ 0.43
SDC1-205ENST00000447124 C5orf49A4QMS7 147 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 A6NIZ1 184 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 NDUFAB1O14561 156 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 IGHV3-13P01766 116 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 CD14P08571 375 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 NR2C1P13056 603 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 MPV17P39210 176 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 RAP1BP61224 184 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 RAP1AP62834 184 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 CCL8P80075 99 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 GLO1Q04760 184 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 SPATA46Q5T0L3 261 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 FAM205BPQ63HN1 556 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 FAM122BQ7Z309 247 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 FAM86B1Q8N7N1 296 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 FAM156AQ8NDB6 213 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 TMEM158Q8WZ71 300 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 CMTM5Q96DZ9 223 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 C7orf34Q96L11 122 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 ZNF416Q9BWM5 594 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 NARFLQ9H6Q4 476 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 NKIRAS2Q9NYR9 191 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 NDUFAF4Q9P032 175 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 TIMM10BQ9Y5J6 103 aa17.7■□□□□ 0.42
SDC1-205ENST00000447124 GMNCA6NCL1 334 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 FAM157AC9JC47 383 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 ATP8B1O43520 1251 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 CDC14BO60729 498 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 NGFP01138 241 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 DRD4P21917 467 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 PRDX6P30041 224 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 GDI2P50395 445 aaKnown RBP17.69■□□□□ 0.42
SDC1-205ENST00000447124 ZNF774Q6NX45 483 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 TMEM154Q6P9G4 183 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 RNF148Q8N7C7 305 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 SLC25A40Q8TBP6 338 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 ANKRD19PQ9H560 264 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 POLE4Q9NR33 117 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 DCAF13Q9NV06 445 aaKnown RBP17.69■□□□□ 0.42
SDC1-205ENST00000447124 TREM2Q9NZC2 230 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 TMEFF2Q9UIK5 374 aaPredicted RBP17.69■□□□□ 0.42
SDC1-205ENST00000447124 GPR160Q9UJ42 338 aa17.69■□□□□ 0.42
SDC1-205ENST00000447124 A0A1W2PPL8 197 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 A0A1W2PRQ8 180 aa17.68■□□□□ 0.42
SDC1-205ENST00000447124 IMPA2O14732 288 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms