RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SURF2Q15527 256 aaPredicted RBP9.48□□□□□ -0.89
LIN54-202ENST00000442461 DEFB134Q4QY38 66 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 MARCH8Q5T0T0 291 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 OGFOD3Q6PK18 319 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 VITQ6UXI7 678 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 SPNS2Q8IVW8 549 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 OR4N5Q8IXE1 308 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 ISG20Q96AZ6 181 aaKnown RBP9.48□□□□□ -0.89
LIN54-202ENST00000442461 RASD2Q96D21 266 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 SDSLQ96GA7 329 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 PEX11GQ96HA9 241 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 ZNF845Q96IR2 970 aaPredicted RBP9.48□□□□□ -0.89
LIN54-202ENST00000442461 TMEM68Q96MH6 324 aa9.48□□□□□ -0.89
LIN54-202ENST00000442461 MYH14Q7Z406 1995 aaKnown RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 A0A1W2PQ45 241 aaPredicted RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 A0A1W2PQY0 241 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 ANKRD20A5PA0PJZ0 165 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 ZC3H12DA2A288 527 aaKnown RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 ZNF860A6NHJ4 632 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 DNASE2O00115 360 aaPredicted RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 GSTZ1O43708 216 aaPredicted RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 SLC2A10O95528 541 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 IGHA2P01877 340 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 EDN1P05305 212 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 HLA-DOBP13765 273 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 DPEP1P16444 411 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 UBE3DQ7Z6J8 389 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 C11orf42Q8N5U0 333 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 NKAIN3Q8N8D7 197 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 ZFP62Q8NB50 900 aaPredicted RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 FAM3CQ92520 227 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 UHRF2Q96PU4 802 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 FAM103A1Q9BTL3 118 aaKnown RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 SMG9Q9H0W8 520 aaKnown RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 SLC6A13Q9NSD5 602 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 PLSCR5A0PG75 271 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 CTDSPLO15194 276 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 OPN1MWP04001 364 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 OPN1MW2P0DN77 364 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 OPN1MW3P0DN78 364 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 TRA2BP62995 288 aaKnown RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 HSF1Q00613 529 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 RAB31Q13636 194 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 DHRS7BQ6IAN0 325 aaPredicted RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 LCN15Q6UWW0 184 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 THNSL2Q86YJ6 484 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 SLC43A2Q8N370 569 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 M1APQ8TC57 530 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 DOK4Q8TEW6 326 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 CCDC74AQ96AQ1 378 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 RPUSD4Q96CM3 377 aaKnown RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 NMNAT3Q96T66 252 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 DDA1Q9BW61 102 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 GPR61Q9BZJ8 451 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 C1orf198Q9H425 327 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 PELI2Q9HAT8 420 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 SIRT3Q9NTG7 399 aaPredicted RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 OR1A2Q9Y585 309 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 CDRT15L2A8MXV6 281 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 LANCL1O43813 399 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 FGF18O76093 207 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 GLSO94925 669 aaPredicted RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 RECKO95980 971 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 TTRP02766 147 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 PNMTP11086 282 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 KITLGP21583 273 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 PTGER1P34995 402 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 BIDP55957 195 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 CNKSR3Q6P9H4 555 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 NKAIN4Q8IVV8 208 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 ZNF511Q8NB15 262 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 MARCH1Q8TCQ1 289 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 KLK6Q92876 244 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 CMBLQ96DG6 245 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 SENP5Q96HI0 755 aaPredicted RBP9.47□□□□□ -0.89
LIN54-202ENST00000442461 SMIM14Q96QK8 99 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 ARHGDIGQ99819 225 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 PRODH2Q9UF12 536 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 SUSD2Q9UGT4 822 aa9.47□□□□□ -0.89
LIN54-202ENST00000442461 OR5K4A6NMS3 321 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 KDM4EB2RXH2 506 aaPredicted RBP9.46□□□□□ -0.89
LIN54-202ENST00000442461 ZNF728P0DKX0 622 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 PTHLHP12272 177 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 OR10J1P30954 320 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 HMGA2P52926 109 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 PMPCAQ10713 525 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 SCGB2A2Q13296 93 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 TMEM128Q5BJH2 165 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 SLC35D3Q5M8T2 416 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 ACER2Q5QJU3 275 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 C6orf132Q5T0Z8 1188 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 RNLSQ5VYX0 342 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 STAC2Q6ZMT1 411 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 ASPGQ86U10 573 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 UEVLDQ8IX04 471 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 SLC22A24Q8N4F4 322 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 CLEC1AQ8NC01 280 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 GPX8Q8TED1 209 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms