RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TBCCD1Q9NVR7 557 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 TMEM160Q9NX00 188 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ZNF224Q9NZL3 707 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ZDHHC8Q9ULC8 765 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 CADP27708 2225 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ITPR3Q14573 2671 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 PRR14LQ5THK1 2151 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 IGLV3-9A0A075B6K5 115 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 J3KTA2 159 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 IFNL4K9M1U5 179 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 M0R233 179 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 TNFRSF11BO00300 401 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 CDC42EP2O14613 210 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 SSX4O60224 188 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 OR10H3O60404 316 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 DNAJC8O75937 253 aaPredicted RBP5.52□□□□□ -1.53
USP54-202ENST00000413442 IGHV3-13P01766 116 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 IGHV4-39P01824 125 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 ADH4P08319 380 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 ANXA8P13928 327 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 PCMT1P22061 227 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 STOMP27105 288 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 NOS3P29474 1203 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 THBS4P35443 961 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 CDKN1AP38936 164 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 GDI2P50395 445 aaKnown RBP5.52□□□□□ -1.53
USP54-202ENST00000413442 KLF3P57682 345 aaPredicted RBP5.52□□□□□ -1.53
USP54-202ENST00000413442 SPIBQ01892 262 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 PIGFQ07326 219 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 LGALS3BPQ08380 585 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 NPRL3Q12980 569 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 SNTB2Q13425 540 aaKnown RBP5.52□□□□□ -1.53
USP54-202ENST00000413442 TNK1Q13470 666 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 AQP6Q13520 282 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 MELKQ14680 651 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 RAB39AQ14964 217 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 SGCAQ16586 387 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 MICAQ29983 383 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 OR2T5Q6IEZ7 315 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 RGS7BPQ6MZT1 257 aaPredicted RBP5.52□□□□□ -1.53
USP54-202ENST00000413442 TBPL2Q6SJ96 375 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 CLEC9AQ6UXN8 241 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 RASSF6Q6ZTQ3 369 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 ZBTB46Q86UZ6 589 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 TEX29Q8N6K0 151 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 RNF148Q8N7C7 305 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 SYT14Q8NB59 555 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 PAPD5Q8NDF8 572 aaKnown RBP5.52□□□□□ -1.53
USP54-202ENST00000413442 OR2T29Q8NH02 315 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 SYNPRQ8TBG9 265 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 NEUROG1Q92886 237 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 NABP1Q96AH0 204 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 FBXO17Q96EF6 278 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 RSRC1Q96IZ7 334 aaKnown RBP5.52□□□□□ -1.53
USP54-202ENST00000413442 POM121L2Q96KW2 1035 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 TSPAN32Q96QS1 320 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 SH3GL3Q99963 347 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 OSBPL10Q9BXB5 764 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 DGCR6LQ9BY27 220 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 REEP1Q9H902 201 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 SEC61A2Q9H9S3 476 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 RHCGQ9UBD6 479 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 REV1Q9UBZ9 1251 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 ARFGEF3Q5TH69 2177 aa5.52□□□□□ -1.53
USP54-202ENST00000413442 YLPM1P49750 1951 aaKnown RBP5.51□□□□□ -1.53
USP54-202ENST00000413442 TRAV27A0A087WT01 109 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 TRBV4-1A0A0J9YWV2 114 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 TMEM129A0AVI4 362 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 OR6C6A6NF89 314 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 H7C1Q1 480 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 hCG_2039718K7EN88 272 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 GNGT2O14610 69 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 ACOT8O14734 319 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 SURF4O15260 269 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 CCNB2O95067 398 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 CST1P01037 141 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 APOC1P02654 83 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 ANPEPP15144 967 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 ZNF32P17041 273 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 USF1P22415 310 aaPredicted RBP5.51□□□□□ -1.53
USP54-202ENST00000413442 GCH1P30793 250 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 CALCRP30988 508 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 THBS2P35442 1172 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 GZMKP49863 264 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 ERVK-25P63136 954 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 HIST1H3AP68431 136 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 PPP2R2BQ00005 443 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 PSG4Q00888 419 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 RUNX1T1Q06455 604 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 SLC3A1Q07837 685 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 BNIP1Q12981 228 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 KRR1Q13601 381 aaKnown RBP5.51□□□□□ -1.53
USP54-202ENST00000413442 PABPC1L2AQ5JQF8 200 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 TEX30Q5JUR7 227 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 HIST2H3PS2Q5TEC6 136 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 MBNL2Q5VZF2 373 aaKnown RBP5.51□□□□□ -1.53
USP54-202ENST00000413442 SLC27A4Q6P1M0 643 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 TMEM154Q6P9G4 183 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 B3GLCTQ6Y288 498 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 HIST2H3AQ71DI3 136 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms