RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 MFRPQ9BY79 579 aa10.84□□□□□ -0.67
SPTBN1-203ENST00000389980 MARCH7Q9H992 704 aa10.84□□□□□ -0.67
SPTBN1-203ENST00000389980 PTPRQQ9UMZ3 2332 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 CDK2AP1O14519 115 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 ALOX5APP20292 161 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 CDAP32320 146 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 NTF4P34130 210 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 PTGS2P35354 604 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 SELENOPP49908 381 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 ACTA2P62736 377 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 ACTG2P63267 376 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 TUBA1BP68363 451 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 IFITM3Q01628 133 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 TIMM50Q3ZCQ8 353 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 ZNF404Q494X3 552 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 PHYHD1Q5SRE7 291 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 TUBA1AQ71U36 451 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 FAM109AQ8N4B1 249 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 KBTBD8Q8NFY9 601 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 SLC26A10Q8NG04 563 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 CDADC1Q9BWV3 514 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 LDAHQ9H6V9 325 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 TXNL4BQ9NX01 149 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 MRM2Q9UI43 246 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 SSR3Q9UNL2 185 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 DSPP15924 2871 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 A0A087WV48 116 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 A0A1W2PPL8 197 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 FAM172BPA6NC97 362 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 CD8B2A6NJW9 211 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 ZNHIT1O43257 154 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 KHDRBS3O75525 346 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 RPP14O95059 124 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 VAMP5O95183 116 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 WNT11O96014 354 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 QDPRP09417 244 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 CD8BP10966 210 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 ZNF708P17019 499 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 SDHBP21912 280 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 GABRA5P31644 462 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 HSF2Q03933 536 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 THEM4Q5T1C6 240 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 ZNF684Q5T5D7 378 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 LRFN4Q6PJG9 635 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 LINC00346Q8IVM7 164 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 SPACA3Q8IXA5 215 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 SLC7A5P1Q8MH63 180 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 LILRB4Q8NHJ6 448 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 OTOSQ8NHW6 89 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 ABHD3Q8WU67 409 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 MCHR2Q969V1 340 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 DCBLD2Q96PD2 775 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 OR2M2Q96R28 347 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 SMAD5Q99717 465 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 KCNS3Q9BQ31 491 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 EXO5Q9H790 373 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 ST6GALNAC2Q9UJ37 374 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 IKZF2Q9UKS7 526 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 MSRB2Q9Y3D2 182 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 CHD8Q9HCK8 2581 aa10.83□□□□□ -0.68
SPTBN1-203ENST00000389980 NCOR2Q9Y618 2525 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 ANKRD34BA5PLL1 514 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 ZNF716A6NP11 495 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 LINC01387J3KSC0 135 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 K7EM74 188 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 ACOT7O00154 380 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 DNPH1O43598 174 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 PDGFAP04085 211 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 GAAP10253 952 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 BDH1Q02338 343 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 POU4F3Q15319 338 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 DNM1P34Q6PK57 102 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 CORO6Q6QEF8 472 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 OR13C5Q8NGS8 318 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 HSD17B8Q92506 261 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 RNF166Q96A37 237 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 SEC61A2Q9H9S3 476 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 SLCO1C1Q9NYB5 712 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 UGT2A1Q9Y4X1 527 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 TRAV17A0A0B4J275 112 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 A0A1B0GTH9 108 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 TGM4P49221 684 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 GBX2P52951 348 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 SIRPAP78324 504 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 HIST3H3Q16695 136 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 SLC25A47Q6Q0C1 308 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 LRRN1Q6UXK5 716 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 FCRLAQ7L513 359 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 GLB1L2Q8IW92 636 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 YIPF7Q8N8F6 280 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 OR6N1Q8NGY5 312 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 NEIL3Q8TAT5 605 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 C11orf40Q8WZ69 217 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 CPNE4Q96A23 557 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 DACH2Q96NX9 599 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 ARPC5LQ9BPX5 153 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 ZDHHC11Q9H8X9 412 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 EMC7Q9NPA0 242 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms