RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 MOB4Q9Y3A3 225 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 C5orf51A6NDU8 294 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 POM121BA6NF01 834 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 C17orf112F2Z3M2 114 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 CLIC1O00299 241 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 LHBP01229 141 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 CCL4P13236 92 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 CD44P16070 742 aaKnown RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 TMEM11P17152 192 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 S100PP25815 95 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 RPS5P46782 204 aaKnown RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 SNRPGP62308 76 aaKnown RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 MGAT3Q09327 533 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ZNF468Q5VIY5 522 aaPredicted RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 Q6ZRG5 221 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ZNF551Q7Z340 670 aaPredicted RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 CDC20BQ86Y33 519 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ZNF584Q8IVC4 421 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ZNF695Q8IW36 515 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 PELI3Q8N2H9 469 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 OR10G3Q8NGC4 313 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 OR6T1Q8NGN1 323 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 OR4A5Q8NH83 315 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 CD200R1Q8TD46 325 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 GLYATL2Q8WU03 294 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 CSF3RQ99062 836 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ALG12Q9BV10 488 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ITPAQ9BY32 194 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ZNF665Q9H7R5 613 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 NOX3Q9HBY0 568 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 A4GALTQ9NPC4 353 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 HEYLQ9NQ87 328 aaPredicted RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 TMLHEQ9NVH6 421 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ASF1BQ9NVP2 202 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 COA4Q9NYJ1 87 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 FKBP11Q9NYL4 201 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 TAGLN3Q9UI15 199 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ZDHHC8Q9ULC8 765 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 WDR37Q9Y2I8 494 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ALG5Q9Y673 324 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 MEIKINA0A087WXM9 373 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 TMEM72A0PK05 275 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 FABP12A6NFH5 140 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ZNF815PA8K554 130 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 H3BNX3 289 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 K7ENP7 123 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 SS18L1O75177 396 aaPredicted RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 GHRHP01286 108 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 FUT1P19526 365 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 RPS4Y1P22090 263 aaKnown RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 HOXA11P31270 313 aaPredicted RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 KDELR2P33947 212 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 PIGFQ07326 219 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ACKR1Q16570 336 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 AARDQ4LEZ3 155 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 SLC35D2Q76EJ3 337 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 LINC01356Q8N9X3 169 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ERGIC1Q969X5 290 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 LINC00615Q96LM1 132 aaPredicted RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 WDFY2Q96P53 400 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 NMNAT3Q96T66 252 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 CNN2Q99439 309 aaKnown RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 EHD1Q9H4M9 534 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 CBLN4Q9NTU7 201 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 STOX2Q9P2F5 926 aaPredicted RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 GNG8Q9UK08 70 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 LOC105371242A0A075B767 164 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 KIAA1324LA8MWY0 1029 aaPredicted RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 K7ERQ8 282 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 GPR37O15354 613 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 TYROBPO43914 113 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 NME2P1O60361 137 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 OR5AC1P0C628 307 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 UBBP0CG47 229 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 SMIM18P0DKX4 95 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ZNF93P35789 620 aaPredicted RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 CLDN10P78369 228 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 FOXO1Q12778 655 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 DHRS2Q13268 280 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 CEACAM7Q14002 265 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 NAA40Q86UY6 237 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 ZNF786Q8N393 782 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 C15orf53Q8NAA6 179 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 OR5M8Q8NGP6 311 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 C18orf12Q96KH6 178 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 SIGLEC10Q96LC7 697 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 INTS14Q96SY0 518 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 WDR13Q9H1Z4 485 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 EXO1Q9UQ84 846 aaKnown RBP3.71□□□□□ -1.82
USH2A-202ENST00000366942 CEPT1Q9Y6K0 416 aa3.71□□□□□ -1.82
USH2A-202ENST00000366942 C3P01024 1663 aa3.7□□□□□ -1.82
USH2A-202ENST00000366942 OR4C46A6NHA9 309 aa3.7□□□□□ -1.82
USH2A-202ENST00000366942 FKBP6O75344 327 aa3.7□□□□□ -1.82
USH2A-202ENST00000366942 ALX3O95076 343 aa3.7□□□□□ -1.82
USH2A-202ENST00000366942 DUS4LO95620 317 aaKnown RBP3.7□□□□□ -1.82
USH2A-202ENST00000366942 CD5P06127 495 aa3.7□□□□□ -1.82
USH2A-202ENST00000366942 FGF5P12034 268 aa3.7□□□□□ -1.82
USH2A-202ENST00000366942 EVI2BP34910 448 aa3.7□□□□□ -1.82
USH2A-202ENST00000366942 ADARP55265 1226 aaKnown RBP3.7□□□□□ -1.82
USH2A-202ENST00000366942 RAB1AP62820 205 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms