RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PAQR4Q8N4S7 273 aaPredicted RBP13.37□□□□□ -0.27
DDX55-202ENST00000354291 FGFBP3Q8TAT2 258 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 ZNF519Q8TB69 540 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 RASSF5Q8WWW0 418 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 MOGAT1Q96PD6 335 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 SH3GL1Q99961 368 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 CDH20Q9HBT6 801 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 FBXL3Q9UKT7 428 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 G3V4G9 280 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 OPN1SWP03999 348 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 VSIG8P0DPA2 414 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 CYLC2Q14093 348 aaPredicted RBP13.36□□□□□ -0.27
DDX55-202ENST00000354291 ENTPD8Q5MY95 495 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 TTC33Q6PID6 262 aaPredicted RBP13.36□□□□□ -0.27
DDX55-202ENST00000354291 NHLRC1Q6VVB1 395 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 SKA3Q8IX90 412 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 SLC30A7Q8NEW0 376 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 GPR32P1Q8NGA4 272 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 OR6T1Q8NGN1 323 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 OR6N1Q8NGY5 312 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 OR5J2Q8NH18 312 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 OR10A6Q8NH74 314 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 TXNDC15Q96J42 360 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 FOXB1Q99853 325 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 SLC30A2Q9BRI3 323 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 TCF7L1Q9HCS4 588 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 RNF114Q9Y508 228 aa13.36□□□□□ -0.27
DDX55-202ENST00000354291 TRAPPC13A5PLN9 417 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 CPSF4LA6NMK7 179 aaKnown RBP13.35□□□□□ -0.27
DDX55-202ENST00000354291 C3orf80F5H4A9 247 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 UBOX5O94941 541 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 NDUFA7O95182 113 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 OR6A2O95222 327 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 NPPAP01160 153 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 IGHV1-46P01743 117 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 ADORA3P0DMS8 318 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 CD80P33681 288 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 SEC61A1P61619 476 aaKnown RBP13.35□□□□□ -0.27
DDX55-202ENST00000354291 DEFB112Q30KQ8 113 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 NANOGP8Q6NSW7 305 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 C9orf139Q6ZV77 190 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 ZNF627Q7L945 461 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 ADAMTS16Q8TE57 1224 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 MPP4Q96JB8 637 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 DIRC2Q96SL1 478 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 ULBP2Q9BZM5 246 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 MARCH7Q9H992 704 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 NANOGQ9H9S0 305 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 NPTNQ9Y639 398 aa13.35□□□□□ -0.27
DDX55-202ENST00000354291 SRRM5B3KS81 715 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 LRRN3E7EW58 273 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 HIST1H2ABP04908 130 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 TROVE2P10155 538 aaKnown RBP eCLIP13.34□□□□□ -0.27
DDX55-202ENST00000354291 CD247P20963 164 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 RBMXP38159 391 aaKnown RBP13.34□□□□□ -0.27
DDX55-202ENST00000354291 SLC6A9P48067 706 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 UCP2P55851 309 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 PAX8Q06710 450 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 NPTX1Q15818 432 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 FAM189A2Q15884 450 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 VMACQ2NL98 169 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 BEAN1Q3B7T3 259 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 FAM209AQ5JX71 171 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 CCDC80Q76M96 950 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 HIST3H2AQ7L7L0 130 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 KLHL36Q8N4N3 616 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 CPEB3Q8NE35 698 aaKnown RBP13.34□□□□□ -0.27
DDX55-202ENST00000354291 VANGL1Q8TAA9 524 aaPredicted RBP13.34□□□□□ -0.27
DDX55-202ENST00000354291 HIST1H2ACQ93077 130 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 TAMM41Q96BW9 452 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 ECSITQ9BQ95 431 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 TMEM120AQ9BXJ8 343 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 SLC19A3Q9BZV2 496 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 EGLN1Q9GZT9 426 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 PCDHAC1Q9H158 963 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 RNF121Q9H920 327 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 PATZ1Q9HBE1 687 aaKnown RBP13.34□□□□□ -0.27
DDX55-202ENST00000354291 NANSQ9NR45 359 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 DCAF16Q9NXF7 216 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 SLC7A7Q9UM01 511 aa13.34□□□□□ -0.27
DDX55-202ENST00000354291 POLR3KQ9Y2Y1 108 aaPredicted RBP13.34□□□□□ -0.27
DDX55-202ENST00000354291 C11orf98E9PRG8 122 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 FBP2O00757 339 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 SERPINI2O75830 405 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 CH25HO95992 272 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 GZMMP51124 257 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 BIDP55957 195 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 PDCD1Q15116 288 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 ZNF74Q16587 644 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 COQ5Q5HYK3 327 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 RBM45Q8IUH3 476 aaKnown RBP13.33□□□□□ -0.28
DDX55-202ENST00000354291 SPICQ8N5J4 248 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 OR8J3Q8NGG0 315 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 OR6X1Q8NH79 312 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 CHIAQ9BZP6 476 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 BCL2L14Q9BZR8 327 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 TAS2R5Q9NYW4 299 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 ASH2LQ9UBL3 628 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 OR5V1Q9UGF6 321 aa13.33□□□□□ -0.28
DDX55-202ENST00000354291 ZNF229Q9UJW7 825 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms