RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 PRSS35Q8N3Z0 413 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 OR52E1Q8NGJ3 308 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 OR10R2Q8NGX6 335 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 NUDCD2Q8WVJ2 157 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 HIST1H2BAQ96A08 127 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 PHB2Q99623 299 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 CST11Q9H112 138 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 HTTP42858 3142 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 DNAJB6O75190 326 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 PCCBP05166 539 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 ELNP15502 786 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 ZNF28P17035 718 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 RCC1P18754 421 aaPredicted RBP12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 AVPR2P30518 371 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 PPT1P50897 306 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 DEFB115Q30KQ5 88 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 MAMDC2Q7Z304 686 aaPredicted RBP12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 MRGPRFQ96AM1 343 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 RSPRY1Q96DX4 576 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 CPNE2Q96FN4 548 aaPredicted RBP12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 MAP3K3Q99759 626 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 ULBP3Q9BZM4 244 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 CSAG2Q9Y5P2 127 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 STMND1H3BQB6 276 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 H3BSH0 61 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 SLC31A2O15432 143 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 LY86O95711 162 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 FBXO45P0C2W1 286 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 SFTA3P0C7M3 94 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 PSMB6P28072 239 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 PBX2P40425 430 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 F2RL1P55085 397 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 TAS2R60P59551 318 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 RASGEF1BQ0VAM2 473 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 CHAF1BQ13112 559 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 ERV3-1Q14264 604 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 RBM39Q14498 530 aaKnown RBP12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 PRRT3Q5FWE3 981 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 ASPHD2Q6ICH7 369 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 ZNF614Q8N883 585 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 SLC39A7Q92504 469 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 DCUN1D4Q92564 292 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 C14orf79Q96F83 325 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 SLC41A2Q96JW4 573 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 C4orf45Q96LM5 186 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 ZNF558Q96NG5 402 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 TSSK2Q96PF2 358 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 CHMP1AQ9HD42 196 aaPredicted RBP12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 TREM2Q9NZC2 230 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 KLK13Q9UKR3 277 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 IKZF2Q9UKS7 526 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 FARSAQ9Y285 508 aaKnown RBP12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 PCDHGA1Q9Y5H4 931 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 WNT6Q9Y6F9 365 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 SCN3AQ9NY46 2000 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 A0A0B4J2A0 478 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 A0A1W2PPE3 182 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 RD3LP0DJH9 198 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 APEHP13798 732 aaKnown RBP12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 MPZP25189 248 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 LAP3P28838 519 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 TACR3P29371 465 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 GABRA3P34903 492 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 ID2Q02363 134 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 HGFACQ04756 655 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 FABP9Q0Z7S8 132 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 ZNF561Q8N587 486 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 ZDHHC22Q8N966 263 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 THRSPQ92748 146 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 SMIM8Q96KF7 97 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 PRRT1Q99946 306 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 SHPKQ9UHJ6 478 aa12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 GOLGA4Q13439 2230 aaKnown RBP12.2□□□□□ -0.46
RPUSD4-201ENST00000298317 NARSO43776 548 aaKnown RBP12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 IGHV2-5P01817 119 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 CISD3P0C7P0 127 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 CMPK1P30085 196 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 AQP2P41181 271 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 IL13RA1P78552 427 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 EGR3Q06889 387 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 RUNX2Q13950 521 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 MEF2DQ14814 521 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 ZNF77Q15935 545 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 SSX2Q16385 188 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 ODF4Q2M2E3 257 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 FAHD2BQ6P2I3 314 aaPredicted RBP12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 PAPD4Q6PIY7 484 aaKnown RBP12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 ZNF627Q7L945 461 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 SLC29A4Q7RTT9 530 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 ZSCAN4Q8NAM6 433 aaPredicted RBP12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 SAT2Q96F10 170 aaPredicted RBP12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 RRNAD1Q96FB5 475 aaKnown RBP12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 FAHD2AQ96GK7 314 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 CLCC1Q96S66 551 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 SPSB2Q99619 263 aa12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 NAA11Q9BSU3 229 aaPredicted RBP12.19□□□□□ -0.46
RPUSD4-201ENST00000298317 TMEM74BQ9NUR3 256 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms