RNA–Protein interactions for RNA: YDL166C

FAP7, Transcript of Essential NTPase required for small ribosome subunit synthesis, yeast

Gene FAP7, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAP7	YDL166C	TAF9	Q05027	157 aa		3.58	□□□□□ -1.84
FAP7	YDL166C	PNP1	Q05788	311 aa		3.58	□□□□□ -1.84
FAP7	YDL166C	BDF2	Q07442	638 aa		3.58	□□□□□ -1.84
FAP7	YDL166C	SIL1	Q08199	421 aa		3.58	□□□□□ -1.84
FAP7	YDL166C	DSE3	Q08729	430 aa		3.58	□□□□□ -1.84
FAP7	YDL166C	NYV1	Q12255	253 aa		3.58	□□□□□ -1.84
FAP7	YDL166C	NUC1	P08466	329 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	ERG11	P10614	530 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	PYC1	P11154	1178 aa	Known RBP	3.57	□□□□□ -1.84
FAP7	YDL166C	NAT1	P12945	854 aa	Known RBP	3.57	□□□□□ -1.84
FAP7	YDL166C	TUP1	P16649	713 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	MSB1	P21339	1137 aa	Known RBP	3.57	□□□□□ -1.84
FAP7	YDL166C	ISY1	P21374	235 aa	Predicted RBP	3.57	□□□□□ -1.84
FAP7	YDL166C	BAS1	P22035	811 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	DBF4	P32325	704 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	EFB1	P32471	206 aa	Known RBP	3.57	□□□□□ -1.84
FAP7	YDL166C	EUG1	P32474	517 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	YKL050C	P35736	922 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	LHS1	P36016	881 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	TRZ1	P36159	838 aa	Predicted RBP	3.57	□□□□□ -1.84
FAP7	YDL166C	RRT2	P38332	387 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	HIS2	P38635	335 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	LAM1	P38851	1228 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	VPS45	P38932	577 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	ICP55	P40051	511 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	ALG5	P40350	334 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	NUP82	P40368	713 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	MPH1	P40562	993 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	RLP7	P40693	322 aa	Known RBP	3.57	□□□□□ -1.84
FAP7	YDL166C	AXL1	P40851	1208 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	RRN7	P40992	514 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	ROG3	P43602	733 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	ZIP2	P53061	704 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	DSL1	P53847	754 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	FOL1	P53848	824 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	BUL2	Q03758	920 aa	Known RBP	3.57	□□□□□ -1.84
FAP7	YDL166C	INP2	Q03824	705 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	ARO80	Q04052	950 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	YLR297W	Q05899	129 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	ADY4	Q05955	493 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	YPR097W	Q06839	1073 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
FAP7	YDL166C	ENV9	Q08651	330 aa		3.57	□□□□□ -1.84
FAP7	YDL166C	MYO1	P08964	1928 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	TRP2	P00899	507 aa	Known RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
FAP7	YDL166C	PEP5	P12868	1029 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	CLN3	P13365	580 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	PMS1	P14242	873 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	SNA3	P14359	133 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	SEC21	P32074	935 aa	Known RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	BIO2	P32451	375 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	BCK2	P33306	851 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	VHC1	P38329	1120 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	POP4	P38336	279 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	YHL050C	P38721	697 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	BEM4	P39011	633 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	PDS1	P40316	373 aa	Predicted RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	JEM1	P40358	645 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	IAH1	P41734	238 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	EMW1	P42842	904 aa	Known RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	ARI1	P53111	347 aa	Known RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	PCL10	P53124	433 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	PUS6	P53294	404 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	ESBP6	P53918	673 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	SFB2	P53953	876 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	COG6	P53959	839 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	KTR5	P53966	522 aa	Predicted RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	UBP2	Q01476	1272 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	SEN54	Q02825	467 aa	Predicted RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	DIG1	Q03063	452 aa	Known RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	ATP25	Q03153	612 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	YMR027W	Q04371	470 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	TDA9	Q04545	1251 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	TMA64	Q04600	565 aa	Known RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	DON1	Q05610	365 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	TCO89	Q08921	799 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	KEL3	Q08979	651 aa	Predicted RBP	3.56	□□□□□ -1.84
FAP7	YDL166C	VIK1	Q12045	647 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	TAF3	Q12297	353 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	YPT6	Q99260	215 aa		3.56	□□□□□ -1.84
FAP7	YDL166C	RPL24A	P04449	155 aa	Known RBP	3.55	□□□□□ -1.84
FAP7	YDL166C	ILV2	P07342	687 aa	Known RBP	3.55	□□□□□ -1.84
FAP7	YDL166C	CHS2	P14180	963 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	SEC63	P14906	663 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	PFK1	P16861	987 aa	Known RBP	3.55	□□□□□ -1.84
FAP7	YDL166C	GCD6	P32501	712 aa	Known RBP	3.55	□□□□□ -1.84
FAP7	YDL166C	SEC6	P32844	805 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	COY1	P34237	679 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	ECM4	P36156	370 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	YKR078W	P36158	585 aa	Known RBP	3.55	□□□□□ -1.84
FAP7	YDL166C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
FAP7	YDL166C	UBP13	P38187	747 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	FES1	P38260	290 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	MMS21	P38632	267 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	ERP5	P38819	212 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	FRT2	P39734	528 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	BIM1	P40013	344 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	AIM20	P40451	204 aa		3.55	□□□□□ -1.84
FAP7	YDL166C	DIM1	P41819	318 aa	Known RBP	3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms