RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A RNT1Q02555 471 aa4.43□□□□□ -1.7
RIM1YCR028C-A UTP14Q04500 899 aaKnown RBP4.43□□□□□ -1.7
RIM1YCR028C-A COG8Q04632 607 aa4.43□□□□□ -1.7
RIM1YCR028C-A RPN7Q06103 429 aaKnown RBP4.43□□□□□ -1.7
RIM1YCR028C-A ATG33Q06485 197 aa4.43□□□□□ -1.7
RIM1YCR028C-A YOL073CQ08232 322 aa4.43□□□□□ -1.7
RIM1YCR028C-A MIH1P23748 554 aa4.42□□□□□ -1.7
RIM1YCR028C-A YKR051WP36142 418 aa4.42□□□□□ -1.7
RIM1YCR028C-A ELO3P40319 345 aa4.42□□□□□ -1.7
RIM1YCR028C-A YLR001CQ07895 862 aa4.42□□□□□ -1.7
RIM1YCR028C-A TGL5Q12043 749 aa4.42□□□□□ -1.7
RIM1YCR028C-A ADR1P07248 1323 aa4.42□□□□□ -1.7
RIM1YCR028C-A HMG1P12683 1054 aa4.41□□□□□ -1.7
RIM1YCR028C-A PCM1P38628 557 aaKnown RBP4.41□□□□□ -1.7
RIM1YCR028C-A MIP6P38760 659 aaKnown RBP4.41□□□□□ -1.7
RIM1YCR028C-A PRP31P49704 494 aaPredicted RBP4.41□□□□□ -1.7
RIM1YCR028C-A AMA1P50082 593 aa4.41□□□□□ -1.7
RIM1YCR028C-A CTF4Q01454 927 aa4.41□□□□□ -1.7
RIM1YCR028C-A FRE5Q08908 694 aa4.41□□□□□ -1.7
RIM1YCR028C-A YIR042CP40586 236 aa4.4□□□□□ -1.71
RIM1YCR028C-A HLJ1P48353 224 aa4.4□□□□□ -1.71
RIM1YCR028C-A SLI1P53304 468 aa4.4□□□□□ -1.71
RIM1YCR028C-A SDA1P53313 767 aaKnown RBP4.4□□□□□ -1.71
RIM1YCR028C-A GUD1Q07729 489 aa4.4□□□□□ -1.71
RIM1YCR028C-A INO80P53115 1489 aa4.4□□□□□ -1.71
RIM1YCR028C-A PPR1P07272 904 aaPredicted RBP4.39□□□□□ -1.71
RIM1YCR028C-A CCR4P31384 837 aaKnown RBP4.39□□□□□ -1.71
RIM1YCR028C-A MNN4P36044 1178 aa4.39□□□□□ -1.71
RIM1YCR028C-A YKR018CP36114 725 aa4.39□□□□□ -1.71
RIM1YCR028C-A TEX1P53851 422 aaKnown RBP4.39□□□□□ -1.71
RIM1YCR028C-A YMR206WQ03695 313 aa4.39□□□□□ -1.71
RIM1YCR028C-A AIM44Q99299 758 aa4.39□□□□□ -1.71
RIM1YCR028C-A ADE2P21264 571 aaKnown RBP4.38□□□□□ -1.71
RIM1YCR028C-A BRN1P38170 754 aa4.38□□□□□ -1.71
RIM1YCR028C-A YBR053CP38235 358 aa4.38□□□□□ -1.71
RIM1YCR028C-A SIC1P38634 284 aa4.38□□□□□ -1.71
RIM1YCR028C-A CHS7P38843 316 aa4.38□□□□□ -1.71
RIM1YCR028C-A FPR3P38911 411 aaKnown RBP4.38□□□□□ -1.71
RIM1YCR028C-A MGS1P40151 587 aa4.38□□□□□ -1.71
RIM1YCR028C-A PCL10P53124 433 aa4.38□□□□□ -1.71
RIM1YCR028C-A ARG5,6Q01217 863 aa4.38□□□□□ -1.71
RIM1YCR028C-A GAD1Q04792 585 aa4.38□□□□□ -1.71
RIM1YCR028C-A ADY4Q05955 493 aa4.38□□□□□ -1.71
RIM1YCR028C-A YGR161W-CQ3E744 92 aa4.38□□□□□ -1.71
RIM1YCR028C-A SSN2P38931 1420 aa4.38□□□□□ -1.71
RIM1YCR028C-A LAT1P12695 482 aaKnown RBP4.37□□□□□ -1.71
RIM1YCR028C-A HIS7P33734 552 aaKnown RBP4.37□□□□□ -1.71
RIM1YCR028C-A PPS1P38148 807 aa4.37□□□□□ -1.71
RIM1YCR028C-A YHR112CP38716 378 aa4.37□□□□□ -1.71
RIM1YCR028C-A YJR142WP47173 342 aa4.37□□□□□ -1.71
RIM1YCR028C-A TRZ1P36159 838 aaPredicted RBP4.36□□□□□ -1.71
RIM1YCR028C-A ECM1P39715 212 aa4.36□□□□□ -1.71
RIM1YCR028C-A YJL163CP46996 555 aa4.36□□□□□ -1.71
RIM1YCR028C-A STB4P50104 949 aa4.36□□□□□ -1.71
RIM1YCR028C-A ARP4P80428 489 aa4.36□□□□□ -1.71
RIM1YCR028C-A LEE1Q02799 301 aaKnown RBP4.36□□□□□ -1.71
RIM1YCR028C-A THI73Q07904 523 aa4.36□□□□□ -1.71
RIM1YCR028C-A IRC13Q08630 104 aa4.36□□□□□ -1.71
RIM1YCR028C-A ATG11Q12527 1178 aa4.36□□□□□ -1.71
RIM1YCR028C-A APL2P36000 726 aaPredicted RBP4.35□□□□□ -1.71
RIM1YCR028C-A SPC42P36094 363 aa4.35□□□□□ -1.71
RIM1YCR028C-A APT2P36973 181 aa4.35□□□□□ -1.71
RIM1YCR028C-A CRP1P38845 465 aaKnown RBP4.35□□□□□ -1.71
RIM1YCR028C-A HOS4P40480 1083 aa4.35□□□□□ -1.71
RIM1YCR028C-A YNR029CP53729 429 aaKnown RBP4.35□□□□□ -1.71
RIM1YCR028C-A REC102Q02721 264 aa4.35□□□□□ -1.71
RIM1YCR028C-A GIS1Q03833 894 aa4.35□□□□□ -1.71
RIM1YCR028C-A CTK1Q03957 528 aaKnown RBP4.35□□□□□ -1.71
RIM1YCR028C-A ACF2Q12168 779 aa4.35□□□□□ -1.71
RIM1YCR028C-A SSD1P24276 1250 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
RIM1YCR028C-A ERG6P25087 383 aaKnown RBP4.34□□□□□ -1.71
RIM1YCR028C-A TYS1P36421 394 aaKnown RBP4.34□□□□□ -1.71
RIM1YCR028C-A BCD1P38772 366 aa4.34□□□□□ -1.71
RIM1YCR028C-A CKB2P38930 258 aa4.34□□□□□ -1.71
RIM1YCR028C-A MTL1P53214 551 aa4.34□□□□□ -1.71
RIM1YCR028C-A GPD1Q00055 391 aaKnown RBP4.34□□□□□ -1.71
RIM1YCR028C-A MUK1Q02866 612 aa4.34□□□□□ -1.71
RIM1YCR028C-A OAR1P35731 278 aa4.33□□□□□ -1.72
RIM1YCR028C-A MOH1P38191 138 aa4.33□□□□□ -1.72
RIM1YCR028C-A APN2P38207 520 aa4.33□□□□□ -1.72
RIM1YCR028C-A SSZ1P38788 538 aaKnown RBP4.33□□□□□ -1.72
RIM1YCR028C-A BAP3P41815 604 aa4.33□□□□□ -1.72
RIM1YCR028C-A SET2P46995 733 aaKnown RBP4.33□□□□□ -1.72
RIM1YCR028C-A YJR096WP47137 282 aa4.33□□□□□ -1.72
RIM1YCR028C-A COX18P53239 316 aa4.33□□□□□ -1.72
RIM1YCR028C-A BRE5P53741 515 aaKnown RBP4.33□□□□□ -1.72
RIM1YCR028C-A DOS2P54858 310 aa4.33□□□□□ -1.72
RIM1YCR028C-A MCM21Q06675 368 aa4.33□□□□□ -1.72
RIM1YCR028C-A PRP19P32523 503 aaKnown RBP4.32□□□□□ -1.72
RIM1YCR028C-A AKL1P38080 1108 aaKnown RBP4.32□□□□□ -1.72
RIM1YCR028C-A YHR202WP38887 602 aa4.32□□□□□ -1.72
RIM1YCR028C-A REV7P38927 245 aa4.32□□□□□ -1.72
RIM1YCR028C-A DAS1P47005 663 aa4.32□□□□□ -1.72
RIM1YCR028C-A BFA1P47113 574 aa4.32□□□□□ -1.72
RIM1YCR028C-A PMT3P47190 753 aa4.32□□□□□ -1.72
RIM1YCR028C-A UBC11P52492 156 aa4.32□□□□□ -1.72
RIM1YCR028C-A ISA1Q07821 250 aaPredicted RBP4.32□□□□□ -1.72
RIM1YCR028C-A DCS2Q12123 353 aa4.32□□□□□ -1.72
RIM1YCR028C-A HRP1Q99383 534 aaKnown RBP4.32□□□□□ -1.72
RIM1YCR028C-A RNR1P21524 888 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms