RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 HSP90B1P14625 803 aaKnown RBP16.33■□□□□ 0.21
PHGDH-233ENST00000642021 HAUS7Q99871 368 aa16.33■□□□□ 0.21
PHGDH-233ENST00000642021 DNAJC25Q9H1X3 360 aa16.33■□□□□ 0.21
PHGDH-233ENST00000642021 PPFIA3O75145 1194 aa16.33■□□□□ 0.2
PHGDH-233ENST00000642021 FTOQ9C0B1 505 aaKnown RBP eCLIP16.33■□□□□ 0.2
PHGDH-233ENST00000642021 C5P01031 1676 aa16.33■□□□□ 0.2
PHGDH-233ENST00000642021 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
PHGDH-233ENST00000642021 FOSBP53539 338 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-233ENST00000642021 GOLGA6L6A8MZA4 724 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 TPM3P06753 285 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 ADD1P35611 737 aaKnown RBP16.32■□□□□ 0.2
PHGDH-233ENST00000642021 CASP7P55210 303 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 ADAMTS7Q9UKP4 1686 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 H3BQV1 296 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 ZNF165P49910 485 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 IFFO2Q5TF58 517 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 LMBR1LQ6UX01 489 aa16.32■□□□□ 0.2
PHGDH-233ENST00000642021 RIOK3O14730 519 aaKnown RBP16.31■□□□□ 0.2
PHGDH-233ENST00000642021 CYP27B1O15528 508 aa16.31■□□□□ 0.2
PHGDH-233ENST00000642021 CTDNEP1O95476 244 aa16.31■□□□□ 0.2
PHGDH-233ENST00000642021 PLA2G4DQ86XP0 818 aa16.31■□□□□ 0.2
PHGDH-233ENST00000642021 SMARCC2Q8TAQ2 1214 aa16.31■□□□□ 0.2
PHGDH-233ENST00000642021 DDX17Q92841 729 aaKnown RBP16.31■□□□□ 0.2
PHGDH-233ENST00000642021 TRIM5Q9C035 493 aa16.31■□□□□ 0.2
PHGDH-233ENST00000642021 BCL2L12Q9HB09 334 aa16.31■□□□□ 0.2
PHGDH-233ENST00000642021 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-233ENST00000642021 ZNF75DP51815 510 aa16.31■□□□□ 0.2
PHGDH-233ENST00000642021 TIMM10P62072 90 aa16.31■□□□□ 0.2
PHGDH-233ENST00000642021 TDRD7Q8NHU6 1098 aaKnown RBP16.31■□□□□ 0.2
PHGDH-233ENST00000642021 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
PHGDH-233ENST00000642021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-233ENST00000642021 KBTBD3Q8NAB2 608 aa16.3■□□□□ 0.2
PHGDH-233ENST00000642021 NSUN7Q8NE18 718 aaKnown RBP16.3■□□□□ 0.2
PHGDH-233ENST00000642021 RGPD5Q99666 1765 aa16.3■□□□□ 0.2
PHGDH-233ENST00000642021 APOBRQ0VD83 1088 aa16.3■□□□□ 0.2
PHGDH-233ENST00000642021 DRC7Q8IY82 874 aa16.3■□□□□ 0.2
PHGDH-233ENST00000642021 IFNL2Q8IZJ0 200 aa16.3■□□□□ 0.2
PHGDH-233ENST00000642021 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
PHGDH-233ENST00000642021 MEGF6O75095 1541 aa16.3■□□□□ 0.2
PHGDH-233ENST00000642021 GOLIM4O00461 696 aa16.29■□□□□ 0.2
PHGDH-233ENST00000642021 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
PHGDH-233ENST00000642021 A0A087WWV3 80 aa16.29■□□□□ 0.2
PHGDH-233ENST00000642021 PFKFB2O60825 505 aa16.29■□□□□ 0.2
PHGDH-233ENST00000642021 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
PHGDH-233ENST00000642021 ATG9AQ7Z3C6 839 aa16.29■□□□□ 0.2
PHGDH-233ENST00000642021 ZSCAN16Q9H4T2 348 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-233ENST00000642021 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
PHGDH-233ENST00000642021 FOXO4P98177 505 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 CCDC144BQ3MJ40 725 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
PHGDH-233ENST00000642021 CCDC144CPQ8IYA2 1237 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 CCDC94Q9BW85 323 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-233ENST00000642021 ZSCAN25Q6NSZ9 544 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 CHST3Q7LGC8 479 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 CABLES1Q8TDN4 633 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 GOLPH3LQ9H4A5 285 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 CFAP45Q9UL16 551 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 NAP1L2Q9ULW6 460 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-233ENST00000642021 LMTK3Q96Q04 1460 aa16.28■□□□□ 0.2
PHGDH-233ENST00000642021 EXOSC10Q01780 885 aaKnown RBP16.27■□□□□ 0.2
PHGDH-233ENST00000642021 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-233ENST00000642021 PTPDC1A2A3K4 754 aa16.27■□□□□ 0.2
PHGDH-233ENST00000642021 IQCB1Q15051 598 aa16.27■□□□□ 0.2
PHGDH-233ENST00000642021 CACTINQ8WUQ7 758 aaKnown RBP16.27■□□□□ 0.2
PHGDH-233ENST00000642021 USP28Q96RU2 1077 aa16.27■□□□□ 0.2
PHGDH-233ENST00000642021 RFX7Q2KHR2 1363 aa16.27■□□□□ 0.19
PHGDH-233ENST00000642021 SH3TC1Q8TE82 1336 aa16.27■□□□□ 0.19
PHGDH-233ENST00000642021 NBPF26B4DH59 902 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 GUCY1B3Q02153 619 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 CHRNA2Q15822 529 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 NBPF14Q5TI25 921 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 NBPF10Q6P3W6 841 aaKnown RBP16.26■□□□□ 0.19
PHGDH-233ENST00000642021 NBPF15Q8N660 670 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 DCAF5Q96JK2 942 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 PAG1Q9NWQ8 432 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 RCOR1Q9UKL0 485 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 SNW1Q13573 536 aaKnown RBP16.26■□□□□ 0.19
PHGDH-233ENST00000642021 CCAR1Q8IX12 1150 aaKnown RBP16.26■□□□□ 0.19
PHGDH-233ENST00000642021 H7C1W4 665 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 HSPD1P10809 573 aaKnown RBP16.26■□□□□ 0.19
PHGDH-233ENST00000642021 LRRC24Q50LG9 513 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 ZNF594Q96JF6 807 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-233ENST00000642021 C16orf45Q96MC5 204 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-233ENST00000642021 LLPHQ9BRT6 129 aaKnown RBP16.26■□□□□ 0.19
PHGDH-233ENST00000642021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
PHGDH-233ENST00000642021 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
PHGDH-233ENST00000642021 ARID5BQ14865 1188 aa16.25■□□□□ 0.19
PHGDH-233ENST00000642021 TTLL5Q6EMB2 1281 aa16.25■□□□□ 0.19
PHGDH-233ENST00000642021 TTLL7Q6ZT98 887 aa16.25■□□□□ 0.19
PHGDH-233ENST00000642021 ILDR1Q86SU0 546 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-233ENST00000642021 PROSER2Q86WR7 435 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-233ENST00000642021 ERCC4Q92889 916 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-233ENST00000642021 AGXT2Q9BYV1 514 aa16.25■□□□□ 0.19
PHGDH-233ENST00000642021 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-233ENST00000642021 E7EWF7 191 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms