RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 FOXO4P98177 505 aa12.63□□□□□ -0.39
PHGDH-224ENST00000641711 MTX1Q13505 466 aa12.63□□□□□ -0.39
PHGDH-224ENST00000641711 GPR162Q16538 588 aa12.63□□□□□ -0.39
PHGDH-224ENST00000641711 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
PHGDH-224ENST00000641711 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
PHGDH-224ENST00000641711 SUCLG2Q96I99 432 aa12.63□□□□□ -0.39
PHGDH-224ENST00000641711 SBF1O95248 1867 aa12.63□□□□□ -0.39
PHGDH-224ENST00000641711 LTBP1Q14766 1721 aa12.62□□□□□ -0.39
PHGDH-224ENST00000641711 A0A1B0GUL6 1792 aa12.62□□□□□ -0.39
PHGDH-224ENST00000641711 PPEF1O14829 653 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-224ENST00000641711 RPS8P62241 208 aaKnown RBP12.62□□□□□ -0.39
PHGDH-224ENST00000641711 ANKRD18AQ8IVF6 992 aa12.62□□□□□ -0.39
PHGDH-224ENST00000641711 ATP6V0A2Q9Y487 856 aa12.62□□□□□ -0.39
PHGDH-224ENST00000641711 ANKRD18BA2A2Z9 1011 aa12.61□□□□□ -0.39
PHGDH-224ENST00000641711 EIF5BO60841 1220 aaKnown RBP12.61□□□□□ -0.39
PHGDH-224ENST00000641711 YBX3P16989 372 aaKnown RBP eCLIP12.61□□□□□ -0.394e-7■□□□□ 9.8
PHGDH-224ENST00000641711 ITGA6P23229 1130 aa12.61□□□□□ -0.39
PHGDH-224ENST00000641711 IGHMBP2P38935 993 aaKnown RBP12.61□□□□□ -0.39
PHGDH-224ENST00000641711 IFIT5Q13325 482 aaKnown RBP12.61□□□□□ -0.39
PHGDH-224ENST00000641711 CCDC57Q2TAC2 916 aa12.61□□□□□ -0.39
PHGDH-224ENST00000641711 LMBR1LQ6UX01 489 aa12.61□□□□□ -0.39
PHGDH-224ENST00000641711 SP8Q8IXZ3 490 aa12.61□□□□□ -0.39
PHGDH-224ENST00000641711 RTKN2Q8IZC4 609 aa12.61□□□□□ -0.39
PHGDH-224ENST00000641711 KAZALD1Q96I82 304 aa12.61□□□□□ -0.39
PHGDH-224ENST00000641711 BICC1Q9H694 974 aaKnown RBP12.61□□□□□ -0.39
PHGDH-224ENST00000641711 GREM2Q9H772 168 aa12.61□□□□□ -0.39
PHGDH-224ENST00000641711 DAXXQ9UER7 740 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-224ENST00000641711 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
PHGDH-224ENST00000641711 CCDC88AQ3V6T2 1871 aa12.6□□□□□ -0.39
PHGDH-224ENST00000641711 ATP8B2P98198 1209 aa12.6□□□□□ -0.39
PHGDH-224ENST00000641711 BECN1Q14457 450 aa12.6□□□□□ -0.39
PHGDH-224ENST00000641711 PLEKHM2Q8IWE5 1019 aa12.6□□□□□ -0.39
PHGDH-224ENST00000641711 JARID2Q92833 1246 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-224ENST00000641711 PSMD1Q99460 953 aa12.6□□□□□ -0.39
PHGDH-224ENST00000641711 VPS33BQ9H267 617 aa12.6□□□□□ -0.39
PHGDH-224ENST00000641711 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-224ENST00000641711 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-224ENST00000641711 ZC3H4Q9UPT8 1303 aaKnown RBP12.6□□□□□ -0.39
PHGDH-224ENST00000641711 EPHA10Q5JZY3 1008 aa12.59□□□□□ -0.39
PHGDH-224ENST00000641711 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
PHGDH-224ENST00000641711 CELF1Q92879 486 aaKnown RBP12.59□□□□□ -0.39
PHGDH-224ENST00000641711 LRRFIP2Q9Y608 721 aaKnown RBP12.59□□□□□ -0.39
PHGDH-224ENST00000641711 C21orf2O43822 256 aa12.58□□□□□ -0.4
PHGDH-224ENST00000641711 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
PHGDH-224ENST00000641711 MPHOSPH8Q99549 860 aa12.58□□□□□ -0.4
PHGDH-224ENST00000641711 C22orf23Q9BZE7 217 aa12.58□□□□□ -0.4
PHGDH-224ENST00000641711 TAOK3Q9H2K8 898 aa12.58□□□□□ -0.4
PHGDH-224ENST00000641711 SEC31BQ9NQW1 1179 aa12.58□□□□□ -0.4
PHGDH-224ENST00000641711 DUOX1Q9NRD9 1551 aa12.58□□□□□ -0.4
PHGDH-224ENST00000641711 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
PHGDH-224ENST00000641711 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
PHGDH-224ENST00000641711 XDHP47989 1333 aa12.58□□□□□ -0.4
PHGDH-224ENST00000641711 COL4A1P02462 1669 aa12.57□□□□□ -0.4
PHGDH-224ENST00000641711 HOXD11P31277 338 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-224ENST00000641711 RBM25P49756 843 aaKnown RBP12.57□□□□□ -0.4
PHGDH-224ENST00000641711 TAF7LQ5H9L4 462 aa12.57□□□□□ -0.4
PHGDH-224ENST00000641711 TTC22Q5TAA0 569 aa12.57□□□□□ -0.4
PHGDH-224ENST00000641711 RTFDC1Q9BY42 306 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-224ENST00000641711 ANKRD2Q9GZV1 360 aa12.57□□□□□ -0.4
PHGDH-224ENST00000641711 OSBPL3Q9H4L5 887 aa12.57□□□□□ -0.4
PHGDH-224ENST00000641711 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
PHGDH-224ENST00000641711 NFKBIEO00221 500 aa12.56□□□□□ -0.4
PHGDH-224ENST00000641711 CDC45O75419 566 aa12.56□□□□□ -0.4
PHGDH-224ENST00000641711 MPNDQ8N594 471 aa12.56□□□□□ -0.4
PHGDH-224ENST00000641711 COPRSQ9NQ92 184 aa12.56□□□□□ -0.4
PHGDH-224ENST00000641711 CIAO1O76071 339 aa12.55□□□□□ -0.4
PHGDH-224ENST00000641711 GSPT1P15170 499 aaKnown RBP12.55□□□□□ -0.4
PHGDH-224ENST00000641711 LMNB1P20700 586 aa12.55□□□□□ -0.4
PHGDH-224ENST00000641711 RFX5P48382 616 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-224ENST00000641711 MFAP1P55081 439 aaKnown RBP12.55□□□□□ -0.4
PHGDH-224ENST00000641711 DPP8Q6V1X1 898 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-224ENST00000641711 TBC1D9Q6ZT07 1266 aa12.55□□□□□ -0.4
PHGDH-224ENST00000641711 ARHGAP27Q6ZUM4 889 aa12.55□□□□□ -0.4
PHGDH-224ENST00000641711 SSH3Q8TE77 659 aa12.55□□□□□ -0.4
PHGDH-224ENST00000641711 CCDC85AQ96PX6 553 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-224ENST00000641711 EYA3Q99504 573 aa12.55□□□□□ -0.4
PHGDH-224ENST00000641711 MROH5Q6ZUA9 1318 aa12.55□□□□□ -0.4
PHGDH-224ENST00000641711 PSME4Q14997 1843 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 SRGAP3O43295 1099 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 ATP2B4P23634 1241 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 SLC4A3P48751 1232 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 PTPN12Q05209 780 aaKnown RBP12.54□□□□□ -0.4
PHGDH-224ENST00000641711 POLA2Q14181 598 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 LEMD3Q9Y2U8 911 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 SALL3Q9BXA9 1300 aa12.54□□□□□ -0.4
PHGDH-224ENST00000641711 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
PHGDH-224ENST00000641711 EYA2O00167 538 aa12.53□□□□□ -0.4
PHGDH-224ENST00000641711 RAB11FIP3O75154 756 aa12.53□□□□□ -0.4
PHGDH-224ENST00000641711 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-224ENST00000641711 GGA1Q9UJY5 639 aa12.53□□□□□ -0.4
PHGDH-224ENST00000641711 WWC3Q9ULE0 1092 aa12.53□□□□□ -0.4
PHGDH-224ENST00000641711 ARAP2Q8WZ64 1704 aa12.53□□□□□ -0.4
PHGDH-224ENST00000641711 MED23Q9ULK4 1368 aa12.53□□□□□ -0.4
PHGDH-224ENST00000641711 IL15P40933 162 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-224ENST00000641711 IARSP41252 1262 aaKnown RBP12.52□□□□□ -0.41
PHGDH-224ENST00000641711 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
PHGDH-224ENST00000641711 C15orf52Q6ZUT6 534 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms