RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 IGHMBP2P38935 993 aaKnown RBP27.43■■□□□ 1.98
SCN1B-206ENST00000638536 KIAA2012Q0VF49 1180 aa27.43■■□□□ 1.98
SCN1B-206ENST00000638536 IFIT5Q13325 482 aaKnown RBP27.43■■□□□ 1.98
SCN1B-206ENST00000638536 RABL6Q3YEC7 729 aaPredicted RBP27.43■■□□□ 1.98
SCN1B-206ENST00000638536 ZKSCAN2Q63HK3 967 aa27.43■■□□□ 1.98
SCN1B-206ENST00000638536 SUPT20HQ8NEM7 779 aa27.43■■□□□ 1.98
SCN1B-206ENST00000638536 JDP2Q8WYK2 163 aa27.43■■□□□ 1.98
SCN1B-206ENST00000638536 KDM2BQ8NHM5 1336 aa27.43■■□□□ 1.98
SCN1B-206ENST00000638536 POTECB2RU33 542 aa27.42■■□□□ 1.98
SCN1B-206ENST00000638536 RIMBP2O15034 1052 aa27.42■■□□□ 1.98
SCN1B-206ENST00000638536 MEIS3Q99687 375 aa27.42■■□□□ 1.98
SCN1B-206ENST00000638536 DPY19L2Q6NUT2 758 aa27.41■■□□□ 1.98
SCN1B-206ENST00000638536 A0A1B0GUL6 1792 aa27.41■■□□□ 1.98
SCN1B-206ENST00000638536 VPS33BQ9H267 617 aa27.41■■□□□ 1.98
SCN1B-206ENST00000638536 UFL1O94874 794 aa27.4■■□□□ 1.98
SCN1B-206ENST00000638536 WASHC4Q2M389 1173 aa27.4■■□□□ 1.98
SCN1B-206ENST00000638536 CCDC57Q2TAC2 916 aa27.4■■□□□ 1.98
SCN1B-206ENST00000638536 MPHOSPH8Q99549 860 aa27.4■■□□□ 1.98
SCN1B-206ENST00000638536 WDR90Q96KV7 1748 aa27.4■■□□□ 1.98
SCN1B-206ENST00000638536 XDHP47989 1333 aa27.39■■□□□ 1.98
SCN1B-206ENST00000638536 RLBP1P12271 317 aa27.39■■□□□ 1.98
SCN1B-206ENST00000638536 NIM1KQ8IY84 436 aa27.39■■□□□ 1.98
SCN1B-206ENST00000638536 TMEM57Q8N5G2 664 aa27.39■■□□□ 1.98
SCN1B-206ENST00000638536 GGA1Q9UJY5 639 aa27.39■■□□□ 1.98
SCN1B-206ENST00000638536 YDJCA8MPS7 323 aa27.38■■□□□ 1.97
SCN1B-206ENST00000638536 UBTFL1P0CB47 393 aaPredicted RBP27.38■■□□□ 1.97
SCN1B-206ENST00000638536 SCN9AQ15858 1988 aa27.37■■□□□ 1.97
SCN1B-206ENST00000638536 SNAP23O00161 211 aa27.37■■□□□ 1.97
SCN1B-206ENST00000638536 CHRNDQ07001 517 aa27.37■■□□□ 1.97
SCN1B-206ENST00000638536 HELBQ8NG08 1087 aaPredicted RBP27.37■■□□□ 1.97
SCN1B-206ENST00000638536 KLHDC4Q8TBB5 520 aa27.37■■□□□ 1.97
SCN1B-206ENST00000638536 PUS3Q9BZE2 481 aaKnown RBP27.37■■□□□ 1.97
SCN1B-206ENST00000638536 DBNDD1Q9H9R9 158 aa27.37■■□□□ 1.97
SCN1B-206ENST00000638536 LRRFIP2Q9Y608 721 aaKnown RBP27.37■■□□□ 1.97
SCN1B-206ENST00000638536 DOK7Q18PE1 504 aa27.36■■□□□ 1.97
SCN1B-206ENST00000638536 ZNRF3Q9ULT6 936 aa27.36■■□□□ 1.97
SCN1B-206ENST00000638536 KCNQ5Q9NR82 932 aa27.35■■□□□ 1.97
SCN1B-206ENST00000638536 RCAN3Q9UKA8 241 aa27.35■■□□□ 1.97
SCN1B-206ENST00000638536 TAF5LO75529 589 aa27.34■■□□□ 1.97
SCN1B-206ENST00000638536 ATP2B4P23634 1241 aa27.34■■□□□ 1.97
SCN1B-206ENST00000638536 EIF6P56537 245 aaKnown RBP27.34■■□□□ 1.97
SCN1B-206ENST00000638536 LDHAL6AQ6ZMR3 332 aa27.34■■□□□ 1.97
SCN1B-206ENST00000638536 CXCL9Q07325 125 aa27.34■■□□□ 1.97
SCN1B-206ENST00000638536 TAF7LQ5H9L4 462 aa27.34■■□□□ 1.97
SCN1B-206ENST00000638536 GJA3Q9Y6H8 435 aa27.34■■□□□ 1.97
SCN1B-206ENST00000638536 PLIN1O60240 522 aa27.33■■□□□ 1.97
SCN1B-206ENST00000638536 KLRK1P26718 216 aa27.33■■□□□ 1.97
SCN1B-206ENST00000638536 TXNRD3Q86VQ6 643 aa27.33■■□□□ 1.97
SCN1B-206ENST00000638536 DZIP1LQ8IYY4 767 aaKnown RBP27.33■■□□□ 1.97
SCN1B-206ENST00000638536 EYA3Q99504 573 aa27.33■■□□□ 1.97
SCN1B-206ENST00000638536 ZC3H12CQ9C0D7 883 aaKnown RBP27.33■■□□□ 1.97
SCN1B-206ENST00000638536 RAD17O75943 681 aa27.32■■□□□ 1.96
SCN1B-206ENST00000638536 VEGFAP15692 232 aaPredicted RBP27.32■■□□□ 1.96
SCN1B-206ENST00000638536 RFX5P48382 616 aaPredicted RBP27.32■■□□□ 1.96
SCN1B-206ENST00000638536 GPC2Q8N158 579 aa27.32■■□□□ 1.96
SCN1B-206ENST00000638536 LRRC24Q50LG9 513 aa27.31■■□□□ 1.96
SCN1B-206ENST00000638536 PANK1Q8TE04 598 aa27.31■■□□□ 1.96
SCN1B-206ENST00000638536 L3MBTL3Q96JM7 780 aaPredicted RBP27.31■■□□□ 1.96
SCN1B-206ENST00000638536 CNNM1Q9NRU3 951 aa27.31■■□□□ 1.96
SCN1B-206ENST00000638536 ECE2O60344 883 aa27.3■■□□□ 1.96
SCN1B-206ENST00000638536 ANKRD2Q9GZV1 360 aa27.3■■□□□ 1.96
SCN1B-206ENST00000638536 SCN4AP35499 1836 aa27.3■■□□□ 1.96
SCN1B-206ENST00000638536 FTSJ3Q8IY81 847 aaKnown RBP27.3■■□□□ 1.96
SCN1B-206ENST00000638536 RIPOR2Q9Y4F9 1068 aa27.3■■□□□ 1.96
SCN1B-206ENST00000638536 ZNF804BA4D1E1 1349 aa27.29■■□□□ 1.96
SCN1B-206ENST00000638536 C1QTNF8P60827 252 aa27.29■■□□□ 1.96
SCN1B-206ENST00000638536 LEMD3Q9Y2U8 911 aa27.29■■□□□ 1.96
SCN1B-206ENST00000638536 GNAI3P08754 354 aa27.28■■□□□ 1.96
SCN1B-206ENST00000638536 PTPN12Q05209 780 aaKnown RBP27.27■■□□□ 1.96
SCN1B-206ENST00000638536 CIAPIN1Q6FI81 312 aa27.27■■□□□ 1.96
SCN1B-206ENST00000638536 IRS2Q9Y4H2 1338 aa27.27■■□□□ 1.96
SCN1B-206ENST00000638536 MED23Q9ULK4 1368 aa27.27■■□□□ 1.96
SCN1B-206ENST00000638536 POTEIP0CG38 1075 aa27.27■■□□□ 1.96
SCN1B-206ENST00000638536 POTEJP0CG39 1038 aa27.27■■□□□ 1.96
SCN1B-206ENST00000638536 SCNN1DP51172 638 aa27.27■■□□□ 1.96
SCN1B-206ENST00000638536 ITPRIPQ8IWB1 547 aa27.27■■□□□ 1.96
SCN1B-206ENST00000638536 TOMM70O94826 608 aa27.26■■□□□ 1.95
SCN1B-206ENST00000638536 PSMD14O00487 310 aa27.25■■□□□ 1.95
SCN1B-206ENST00000638536 PSME4Q14997 1843 aa27.25■■□□□ 1.95
SCN1B-206ENST00000638536 ZBTB7BO15156 539 aaPredicted RBP27.24■■□□□ 1.95
SCN1B-206ENST00000638536 EPS15P42566 896 aa27.24■■□□□ 1.95
SCN1B-206ENST00000638536 TAF1DQ9H5J8 278 aaPredicted RBP27.24■■□□□ 1.95
SCN1B-206ENST00000638536 PA2G4Q9UQ80 394 aaKnown RBP27.24■■□□□ 1.95
SCN1B-206ENST00000638536 ZBTB12Q9Y330 459 aaPredicted RBP27.24■■□□□ 1.95
SCN1B-206ENST00000638536 C16orf71Q8IYS4 520 aaPredicted RBP27.23■■□□□ 1.95
SCN1B-206ENST00000638536 C1orf115Q9H7X2 142 aa27.23■■□□□ 1.95
SCN1B-206ENST00000638536 HACL1Q9UJ83 578 aa27.23■■□□□ 1.95
SCN1B-206ENST00000638536 ZNF646O15015 1829 aaPredicted RBP27.23■■□□□ 1.95
SCN1B-206ENST00000638536 CEP350Q5VT06 3117 aa27.23■■□□□ 1.95
SCN1B-206ENST00000638536 SHTN1A0MZ66 631 aa27.23■■□□□ 1.95
SCN1B-206ENST00000638536 G3V3G9 751 aa27.23■■□□□ 1.95
SCN1B-206ENST00000638536 GNAI2P04899 355 aa27.23■■□□□ 1.95
SCN1B-206ENST00000638536 KCNJ4P48050 445 aa27.23■■□□□ 1.95
SCN1B-206ENST00000638536 GMPSP49915 693 aaPredicted RBP27.23■■□□□ 1.95
SCN1B-206ENST00000638536 DCAF8Q5TAQ9 597 aa27.23■■□□□ 1.95
SCN1B-206ENST00000638536 SIL1Q9H173 461 aa27.22■■□□□ 1.95
SCN1B-206ENST00000638536 IQCA1LA6NCM1 817 aa27.21■■□□□ 1.95
SCN1B-206ENST00000638536 TNIP1Q15025 636 aa27.21■■□□□ 1.95
SCN1B-206ENST00000638536 C20orf194Q5TEA3 1177 aa27.21■■□□□ 1.95
SCN1B-206ENST00000638536 ATG9AQ7Z3C6 839 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms