RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 SRP68Q9UHB9 627 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 THRAP3Q9Y2W1 955 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 ZNF76P36508 570 aa11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 PUM3Q15397 648 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 RNF214Q8ND24 703 aa11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 MCM9Q9NXL9 1143 aa11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 SEC63Q9UGP8 760 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 TULP4Q9NRJ4 1543 aa11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 SSBP05455 408 aaKnown RBP eCLIP11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 BRF1Q92994 677 aa11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 ESYT1Q9BSJ8 1104 aa11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 ZHX3Q9H4I2 956 aa11.58□□□□□ -0.56
KCNMA1-228ENST00000638223 TRPM1Q7Z4N2 1603 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 MAGEB6P1A0A0J9YX57 407 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 HMGB1P09429 215 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 TXLNAP40222 546 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 RBM6P78332 1123 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 KRT85P78386 507 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 BEND3Q5T5X7 828 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 CAVIN1Q6NZI2 390 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 NLGN1Q8N2Q7 840 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 FLAD1Q8NFF5 587 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 PTPRUQ92729 1446 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 PALLDQ8WX93 1383 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 ERBB4Q15303 1308 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 CCDC196A0A1B0GTZ2 297 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 KRT18P05783 430 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 CATIPQ7Z7H3 387 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 NCOA7Q8NI08 942 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 TTC41PQ6P2S7 1318 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 NAP1L5Q96NT1 182 aaPredicted RBP11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 NOL7Q9UMY1 257 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 ADAMTSL3P82987 1691 aa11.57□□□□□ -0.56
KCNMA1-228ENST00000638223 CTSWP56202 376 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 HOMER1Q86YM7 354 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 JMYQ8N9B5 988 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 LIMCH1Q9UPQ0 1083 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 ATF5Q9Y2D1 282 aaPredicted RBP11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 NEURL4Q96JN8 1562 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 PTCH1Q13635 1447 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 RNF113AO15541 343 aaKnown RBP11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 CHST3Q7LGC8 479 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 ZBTB38Q8NAP3 1195 aaPredicted RBP11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 NEXMIFQ5QGS0 1516 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 TPM2P07951 284 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 ANKRD20A12PQ8NF67 263 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 KAT14Q9H8E8 782 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 CDC42BPGQ6DT37 1551 aa11.56□□□□□ -0.56
KCNMA1-228ENST00000638223 MBD4O95243 580 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 CHMP4BP1P59074 171 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 TSR1Q2NL82 804 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 EDC3Q96F86 508 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 C8orf76Q96K31 380 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 HEG1Q9ULI3 1381 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 TSPY3P0CV98 308 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 TSPY8P0CW00 308 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 C2CD5Q86YS7 1000 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 MPNDQ8N594 471 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 WASF1Q92558 559 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 ATG3Q9NT62 314 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 TMEM132AQ24JP5 1023 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 LPIN2Q92539 896 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 GREM2Q9H772 168 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 DENND2AQ9ULE3 1009 aa11.55□□□□□ -0.56
KCNMA1-228ENST00000638223 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 PCCAP05165 728 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 CCDC129Q6ZRS4 1044 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 NECAB1Q8N987 351 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 KLF18A0A0U1RQI7 1052 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 WDHD1O75717 1129 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 SERPINB2P05120 415 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 LRRC24Q50LG9 513 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 CEP170BQ9Y4F5 1589 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 PPIP5K2O43314 1243 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 TRAK2O60296 914 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 MCM5P33992 734 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 ESR2Q92731 530 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 MYO5BQ9ULV0 1848 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 ZNF853P0CG23 659 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 WTAPQ15007 396 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 GPR162Q16538 588 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 TEX11Q8IYF3 940 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 SPATA32Q96LK8 384 aa11.54□□□□□ -0.56
KCNMA1-228ENST00000638223 CPSF1Q10570 1443 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 ABCC4O15439 1325 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 PDE6BP35913 854 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 IARSP41252 1262 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 GYG1P46976 350 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 TRMT1LQ7Z2T5 733 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 SH2B1Q9NRF2 756 aaPredicted RBP11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 ORC3Q9UBD5 711 aaPredicted RBP11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 KDRP35968 1356 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 USP31Q70CQ4 1352 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 SMIM5Q71RC9 77 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 TBC1D2Q9BYX2 928 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 HMG20BQ9P0W2 317 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms