RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 USP25Q9UHP3 1055 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 ANAPC4Q9UJX5 808 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 METAP2P50579 478 aaKnown RBP eCLIP19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 RABEP2Q9H5N1 569 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 HECW1Q76N89 1606 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 PPP1R9BQ96SB3 815 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 RAB34Q9BZG1 259 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 CCDC196A0A1B0GTZ2 297 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 CCDC183Q5T5S1 534 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 TCEANC2Q96MN5 208 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 CHMP2AO43633 222 aa19.33■□□□□ 0.69
CACNA1A-253ENST00000637927 MAP9Q49MG5 647 aa19.33■□□□□ 0.69
CACNA1A-253ENST00000637927 CHST3Q7LGC8 479 aa19.33■□□□□ 0.69
CACNA1A-253ENST00000637927 MAK16Q9BXY0 300 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-253ENST00000637927 EAPPQ56P03 285 aaPredicted RBP19.33■□□□□ 0.69
CACNA1A-253ENST00000637927 CCDC117Q8IWD4 279 aaPredicted RBP19.33■□□□□ 0.69
CACNA1A-253ENST00000637927 ANKRD24Q8TF21 1146 aa19.33■□□□□ 0.69
CACNA1A-253ENST00000637927 FRMD4BQ9Y2L6 1034 aa19.33■□□□□ 0.69
CACNA1A-253ENST00000637927 HLA-DOAP06340 250 aa19.33■□□□□ 0.68
CACNA1A-253ENST00000637927 SLF2Q8IX21 1173 aa19.33■□□□□ 0.68
CACNA1A-253ENST00000637927 SMARCC1Q92922 1105 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-253ENST00000637927 FAM169AQ9Y6X4 670 aa19.33■□□□□ 0.68
CACNA1A-253ENST00000637927 KIF4AO95239 1232 aa19.33■□□□□ 0.68
CACNA1A-253ENST00000637927 CFAP157Q5JU67 520 aa19.33■□□□□ 0.68
CACNA1A-253ENST00000637927 SREK1Q8WXA9 508 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-253ENST00000637927 HSF2BPO75031 334 aa19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 EIF6P56537 245 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 RSPH3Q86UC2 560 aa19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 TCP11L1Q9NUJ3 509 aa19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 EHBP1L1Q8N3D4 1523 aa19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 DAPK1P53355 1430 aa19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 CABLES1Q8TDN4 633 aa19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 BZW2Q9Y6E2 419 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 MTERF4Q7Z6M4 381 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 AFG3L2Q9Y4W6 797 aa19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 EPRSP07814 1512 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 FAM184BQ9ULE4 1060 aa19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 LIMCH1Q9UPQ0 1083 aa19.32■□□□□ 0.68
CACNA1A-253ENST00000637927 MPHOSPH6Q99547 160 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 LRRC45Q96CN5 670 aa19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 TXNDC16Q9P2K2 825 aa19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 CEP112Q8N8E3 955 aa19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 AMOTQ4VCS5 1084 aa19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 CCDC12Q8WUD4 166 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 V9GYY5 206 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 KIF5BP33176 963 aa19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 RRAGBQ5VZM2 374 aa19.31■□□□□ 0.68
CACNA1A-253ENST00000637927 PI4KAP2A4QPH2 592 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 CYP7A1P22680 504 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 PI4KAP1Q8N8J0 262 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 ABCF3Q9NUQ8 709 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 SLC4A4Q9Y6R1 1079 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 SPDYE16A6NNV3 312 aaPredicted RBP19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 RARSP54136 660 aaKnown RBP19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 PDE4BQ07343 736 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 PPFIA1Q13136 1202 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 SEPT6Q14141 434 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 CDC5LQ99459 802 aaKnown RBP19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 TLDC2A0PJX2 215 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 IFT81Q8WYA0 676 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 IRAK4Q9NWZ3 460 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 ANKFY1Q9P2R3 1169 aa19.3■□□□□ 0.68
CACNA1A-253ENST00000637927 IARSP41252 1262 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 CCDC170Q8IYT3 715 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 PLEKHA4Q9H4M7 779 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 RNF41Q9H4P4 317 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 CHPF2Q9P2E5 772 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 RPGRIP1LQ68CZ1 1315 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 RXRAP19793 462 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 DCAF17Q5H9S7 520 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 BACH1O14867 736 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 ACRBPQ8NEB7 543 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 HFM1A2PYH4 1435 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 BAG3O95817 575 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 NCBP1Q09161 790 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 RAB3GAP1Q15042 981 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 SEC62Q99442 399 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
CACNA1A-253ENST00000637927 IFIT1BQ5T764 474 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 PPP1R42Q7Z4L9 355 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 STK25O00506 426 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 MICALCLQ6ZW33 695 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 KIFC2Q96AC6 838 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 MARCKSP29966 332 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 RNF169Q8NCN4 708 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 STAT6P42226 847 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 FMNL3Q8IVF7 1028 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 CEP135Q66GS9 1140 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 DAPK3O43293 454 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 HSPA1LP34931 641 aa19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 ORC3Q9UBD5 711 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-253ENST00000637927 SETDB2Q96T68 719 aa19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 FAM135AQ9P2D6 1515 aa19.27■□□□□ 0.68
CACNA1A-253ENST00000637927 ZSCAN12O43309 604 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms