RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 CCDC102BQ68D86 513 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 SPDYE3A6NKU9 549 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 SYKP43405 635 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 USP37Q86T82 979 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 CCDC50Q8IVM0 306 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 PLVAPQ9BX97 442 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 ECHDC1Q9NTX5 307 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 RTN1Q16799 776 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 EPSTI1Q96J88 318 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 KRT23Q9C075 422 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 NIP7Q9Y221 180 aaKnown RBP eCLIP18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 NAA16Q6N069 864 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 NLRP3Q96P20 1036 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 C6orf163Q5TEZ5 329 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 FBXO31Q5XUX0 539 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 DMRT2Q9Y5R5 561 aa18.17■□□□□ 0.5
CACNA1A-221ENST00000636012 ZBTB43O43298 467 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 SNW1Q13573 536 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 RRAGBQ5VZM2 374 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 ANKRD13DQ6ZTN6 518 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 ZNF804AQ7Z570 1209 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 SKAP1Q86WV1 359 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 JAG2Q9Y219 1238 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 CCDC6Q16204 474 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 SELENOOQ9BVL4 669 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 RMND1Q9NWS8 449 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 SPECC1LQ69YQ0 1117 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 FBF1Q8TES7 1133 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 SMARCC1Q92922 1105 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 ALG1Q9BT22 464 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 ADCY5O95622 1261 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 UBASH3AP57075 661 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 GSDMDP57764 484 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 RPUSD2Q8IZ73 545 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 CEP112Q8N8E3 955 aa18.16■□□□□ 0.5
CACNA1A-221ENST00000636012 KLF18A0A0U1RQI7 1052 aa18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 ERCC5P28715 1186 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 C6orf50Q9HD87 102 aa18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 SEPT10Q9P0V9 454 aa18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 TFCP2L1Q9NZI6 479 aa18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 ZCRB1Q8TBF4 217 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 SPAG5Q96R06 1193 aa18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 CHPF2Q9P2E5 772 aa18.15■□□□□ 0.5
CACNA1A-221ENST00000636012 UQCRFS1P1P0C7P4 283 aa18.14■□□□□ 0.5
CACNA1A-221ENST00000636012 NECAB1Q8N987 351 aa18.14■□□□□ 0.5
CACNA1A-221ENST00000636012 SMC1BQ8NDV3 1235 aa18.14■□□□□ 0.5
CACNA1A-221ENST00000636012 GTPBP4Q9BZE4 634 aaKnown RBP18.14■□□□□ 0.5
CACNA1A-221ENST00000636012 LMOD1P29536 600 aaPredicted RBP18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 CKAP4Q07065 602 aaKnown RBP18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 MAP7D1Q3KQU3 841 aa18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 RBM27Q9P2N5 1060 aaKnown RBP18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 MSH6P52701 1360 aa18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 MAGEB6P1A0A0J9YX57 407 aa18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 FAM13AO94988 1023 aa18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 SLU7O95391 586 aaKnown RBP18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 C20orf194Q5TEA3 1177 aa18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 DDX19AQ9NUU7 478 aaKnown RBP18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 ESR2Q92731 530 aa18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 SEPT14Q6ZU15 432 aa18.14■□□□□ 0.49
CACNA1A-221ENST00000636012 IFT140Q96RY7 1462 aa18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 POLD1P28340 1107 aa18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 PDE1CQ14123 709 aaPredicted RBP18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 ZSCAN30Q86W11 494 aa18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 CGNQ9P2M7 1197 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 CCDC141Q6ZP82 1450 aa18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 AKR1B10O60218 316 aa18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 ZC3H12CQ9C0D7 883 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 PFDN4Q9NQP4 134 aa18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 TBC1D9Q6ZT07 1266 aa18.13■□□□□ 0.49
CACNA1A-221ENST00000636012 TIAM1Q13009 1591 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 SBNO2Q9Y2G9 1366 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 PLCB3Q01970 1234 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 ZNF408Q9H9D4 720 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 MARCKSP29966 332 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 MAK16Q9BXY0 300 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 FEZ2Q9UHY8 353 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 NYXQ9GZU5 481 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 CEP83Q9Y592 693 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 B4DLN1 442 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 RFX1P22670 979 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 MRPL12P52815 198 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 GNG11P61952 73 aa18.12■□□□□ 0.49
CACNA1A-221ENST00000636012 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 WHAMMQ8TF30 809 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 JDP2Q8WYK2 163 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 ASIC1P78348 528 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 PPP4R4Q6NUP7 873 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 MAGEB6Q8N7X4 407 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 TRIM27P14373 513 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 SNX16P57768 344 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 CEP135Q66GS9 1140 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
CACNA1A-221ENST00000636012 KIF4AO95239 1232 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms