RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 NAP1L5Q96NT1 182 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 NYXQ9GZU5 481 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 WDR19Q8NEZ3 1342 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 SLC27A2O14975 620 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 FIBPO43427 364 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 TPM2P07951 284 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 ZSCAN23Q3MJ62 389 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 KRT23Q9C075 422 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 ELP1O95163 1332 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 GOLIM4O00461 696 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 IGKV5-2P06315 115 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 PTPN12Q05209 780 aaKnown RBP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 CAVIN4Q5BKX8 364 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 ZNF287Q9HBT7 754 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 RPAP1Q9BWH6 1393 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 PIK3C2AO00443 1686 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 SYT1P21579 422 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 MAP7D2Q96T17 732 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 RBM27Q9P2N5 1060 aaKnown RBP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 BRPF3Q9ULD4 1205 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 NEMFO60524 1076 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 NFXL1Q6ZNB6 911 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 ZNF274Q96GC6 653 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-210ENST00000635776 NECTIN1Q15223 517 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 TMEM87BQ96K49 555 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 PYM1Q9BRP8 204 aaKnown RBP5.34□□□□□ -1.55
SCN1A-210ENST00000635776 LMBRD1Q9NUN5 540 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 DACH1Q9UI36 760 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 USP54Q70EL1 1684 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 BMP15O95972 392 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 PIP4K2AP48426 406 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-210ENST00000635776 PLCB2Q00722 1185 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 UBE3CQ15386 1083 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 DZIP3Q86Y13 1208 aaKnown RBP5.34□□□□□ -1.55
SCN1A-210ENST00000635776 DRC7Q8IY82 874 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 UTP14AQ9BVJ6 771 aaKnown RBP5.34□□□□□ -1.55
SCN1A-210ENST00000635776 MED1Q15648 1581 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-210ENST00000635776 CARMIL3Q8ND23 1372 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 TSHZ3Q63HK5 1081 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 BRAPQ7Z569 592 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 CEP131Q9UPN4 1083 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 ADAMTSL3P82987 1691 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 SASH1O94885 1247 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 HSPA2P54652 639 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 LPIN2Q92539 896 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 ZNF512BQ96KM6 892 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-210ENST00000635776 DBNDD2Q9BQY9 259 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 TNMDQ9H2S6 317 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 BTG4Q9NY30 223 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 RGPD1P0DJD0 1748 aa5.34□□□□□ -1.55
SCN1A-210ENST00000635776 A0A1B0GUL7 405 aa5.34□□□□□ -1.56
SCN1A-210ENST00000635776 CCP110O43303 1012 aa5.34□□□□□ -1.56
SCN1A-210ENST00000635776 PCP11498 1178 aaKnown RBP5.34□□□□□ -1.56
SCN1A-210ENST00000635776 STK38Q15208 465 aa5.34□□□□□ -1.56
SCN1A-210ENST00000635776 PROSER3Q2NL68 480 aa5.34□□□□□ -1.56
SCN1A-210ENST00000635776 ISCA1Q9BUE6 129 aa5.34□□□□□ -1.56
SCN1A-210ENST00000635776 ZGPATQ8N5A5 531 aaKnown RBP5.34□□□□□ -1.56
SCN1A-210ENST00000635776 IRS4O14654 1257 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-210ENST00000635776 PDIA6Q15084 440 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 CEP57L1Q8IYX8 460 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 PALLDQ8WX93 1383 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 PUM3Q15397 648 aaKnown RBP5.33□□□□□ -1.56
SCN1A-210ENST00000635776 FOXD4L5Q5VV16 416 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-210ENST00000635776 USPL1Q5W0Q7 1092 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 SPTY2D1Q68D10 685 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-210ENST00000635776 FOXD4L4Q8WXT5 416 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-210ENST00000635776 KCNG4Q8TDN1 519 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 ANKRD2Q9GZV1 360 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 CCDC87Q9NVE4 849 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 CCDC69A6NI79 296 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 SEMA3EO15041 775 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 TUBB4AP04350 444 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 DDX46Q7L014 1031 aaKnown RBP5.33□□□□□ -1.56
SCN1A-210ENST00000635776 NAPBQ9H115 298 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 TAF5LO75529 589 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 LDHCP07864 332 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 CALM1P0DP23 149 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 CALM2P0DP24 149 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 CALM3P0DP25 149 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 ZMYM1Q5SVZ6 1142 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 BRF1Q92994 677 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 PPP1R9BQ96SB3 815 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 TOMM22Q9NS69 142 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 USP25Q9UHP3 1055 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 TERF1P54274 439 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 ANO10Q9NW15 660 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 DBNLQ9UJU6 430 aaKnown RBP5.33□□□□□ -1.56
SCN1A-210ENST00000635776 SMTNL1A8MU46 457 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 CLEC4GQ6UXB4 293 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 SLF2Q8IX21 1173 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 C8orf76Q96K31 380 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 SDF4Q9BRK5 362 aa5.33□□□□□ -1.56
SCN1A-210ENST00000635776 TTC14Q96N46 770 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 NOL7Q9UMY1 257 aaKnown RBP5.32□□□□□ -1.56
SCN1A-210ENST00000635776 SYCE3A1L190 88 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 PFKFB2O60825 505 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 CCDC47Q96A33 483 aaKnown RBP5.32□□□□□ -1.56
SCN1A-210ENST00000635776 FAM13BQ9NYF5 915 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 IDH1O75874 414 aaKnown RBP5.32□□□□□ -1.56
SCN1A-210ENST00000635776 USP48Q86UV5 1035 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms