RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 DCAF8L1A6NGE4 600 aa23.42■■□□□ 1.34
MECP2-216ENST00000627864 NEFLP07196 543 aa23.42■■□□□ 1.34
MECP2-216ENST00000627864 ARHGAP27Q6ZUM4 889 aa23.42■■□□□ 1.34
MECP2-216ENST00000627864 SIRT2Q8IXJ6 389 aa23.42■■□□□ 1.34
MECP2-216ENST00000627864 COPRSQ9NQ92 184 aa23.42■■□□□ 1.34
MECP2-216ENST00000627864 MINPP1Q9UNW1 487 aa23.42■■□□□ 1.34
MECP2-216ENST00000627864 PCDHB15Q9Y5E8 787 aa23.42■■□□□ 1.34
MECP2-216ENST00000627864 HMMRO75330 724 aa23.41■■□□□ 1.34
MECP2-216ENST00000627864 LRRC24Q50LG9 513 aa23.41■■□□□ 1.34
MECP2-216ENST00000627864 SBF1O95248 1867 aa23.41■■□□□ 1.34
MECP2-216ENST00000627864 EYA2O00167 538 aa23.4■■□□□ 1.34
MECP2-216ENST00000627864 GPSM2P81274 684 aa23.4■■□□□ 1.34
MECP2-216ENST00000627864 RTKN2Q8IZC4 609 aa23.4■■□□□ 1.34
MECP2-216ENST00000627864 MPNDQ8N594 471 aa23.4■■□□□ 1.34
MECP2-216ENST00000627864 NSFL1CQ9UNZ2 370 aaKnown RBP23.4■■□□□ 1.34
MECP2-216ENST00000627864 CHRNDQ07001 517 aa23.39■■□□□ 1.33
MECP2-216ENST00000627864 HELBQ8NG08 1087 aaPredicted RBP23.39■■□□□ 1.33
MECP2-216ENST00000627864 ANKIB1Q9P2G1 1089 aa23.39■■□□□ 1.33
MECP2-216ENST00000627864 RIPOR2Q9Y4F9 1068 aa23.39■■□□□ 1.33
MECP2-216ENST00000627864 GRIN3BO60391 1043 aa23.38■■□□□ 1.33
MECP2-216ENST00000627864 SURF6O75683 361 aaKnown RBP23.38■■□□□ 1.33
MECP2-216ENST00000627864 G3BP1Q13283 466 aaKnown RBP eCLIP23.38■■□□□ 1.33
MECP2-216ENST00000627864 GRIPAP1Q4V328 841 aa23.38■■□□□ 1.33
MECP2-216ENST00000627864 DPP8Q6V1X1 898 aaPredicted RBP23.38■■□□□ 1.33
MECP2-216ENST00000627864 ANKRD2Q9GZV1 360 aa23.38■■□□□ 1.33
MECP2-216ENST00000627864 FBXO3Q9UK99 471 aa23.38■■□□□ 1.33
MECP2-216ENST00000627864 LTBP1Q14766 1721 aa23.38■■□□□ 1.33
MECP2-216ENST00000627864 CIAO1O76071 339 aa23.37■■□□□ 1.33
MECP2-216ENST00000627864 ATG9AQ7Z3C6 839 aa23.37■■□□□ 1.33
MECP2-216ENST00000627864 XDHP47989 1333 aa23.36■■□□□ 1.33
MECP2-216ENST00000627864 MROH5Q6ZUA9 1318 aa23.36■■□□□ 1.33
MECP2-216ENST00000627864 TAF5LO75529 589 aa23.36■■□□□ 1.33
MECP2-216ENST00000627864 OS9Q13438 667 aaPredicted RBP23.36■■□□□ 1.33
MECP2-216ENST00000627864 METTL24Q5JXM2 366 aa23.36■■□□□ 1.33
MECP2-216ENST00000627864 SNED1Q8TER0 1413 aa23.35■■□□□ 1.33
MECP2-216ENST00000627864 IL15P40933 162 aaPredicted RBP23.35■■□□□ 1.33
MECP2-216ENST00000627864 PODXL2Q9NZ53 605 aa23.35■■□□□ 1.33
MECP2-216ENST00000627864 CHD4Q14839 1912 aa23.35■■□□□ 1.33
MECP2-216ENST00000627864 SRCAPQ6ZRS2 3230 aa23.35■■□□□ 1.33
MECP2-216ENST00000627864 DICER1Q9UPY3 1922 aaKnown RBP23.34■■□□□ 1.33
MECP2-216ENST00000627864 C6orf229H3BNL8 230 aa23.34■■□□□ 1.33
MECP2-216ENST00000627864 NFKBIEO00221 500 aa23.34■■□□□ 1.33
MECP2-216ENST00000627864 FKBP4Q02790 459 aaKnown RBP eCLIP23.34■■□□□ 1.33
MECP2-216ENST00000627864 RASSF7Q02833 373 aa23.34■■□□□ 1.33
MECP2-216ENST00000627864 TAOK3Q9H2K8 898 aa23.34■■□□□ 1.33
MECP2-216ENST00000627864 GGA1Q9UJY5 639 aa23.34■■□□□ 1.33
MECP2-216ENST00000627864 EXOC6BQ9Y2D4 811 aa23.34■■□□□ 1.33
MECP2-216ENST00000627864 NOP58Q9Y2X3 529 aaKnown RBP23.34■■□□□ 1.33
MECP2-216ENST00000627864 DUOX1Q9NRD9 1551 aa23.33■■□□□ 1.33
MECP2-216ENST00000627864 UFL1O94874 794 aa23.33■■□□□ 1.33
MECP2-216ENST00000627864 ATP2B4P23634 1241 aa23.33■■□□□ 1.33
MECP2-216ENST00000627864 TBC1D16Q8TBP0 767 aa23.33■■□□□ 1.33
MECP2-216ENST00000627864 PSMD1Q99460 953 aa23.33■■□□□ 1.33
MECP2-216ENST00000627864 CEP126Q9P2H0 1117 aa23.33■■□□□ 1.33
MECP2-216ENST00000627864 POLLQ9UGP5 575 aa23.33■■□□□ 1.33
MECP2-216ENST00000627864 WTIPA6NIX2 430 aaPredicted RBP23.32■■□□□ 1.32
MECP2-216ENST00000627864 KCNJ4P48050 445 aa23.32■■□□□ 1.32
MECP2-216ENST00000627864 SUPT20HQ8NEM7 779 aa23.32■■□□□ 1.32
MECP2-216ENST00000627864 LEMD3Q9Y2U8 911 aa23.32■■□□□ 1.32
MECP2-216ENST00000627864 SNAP23O00161 211 aa23.31■■□□□ 1.32
MECP2-216ENST00000627864 HSP90AB4PQ58FF6 505 aa23.31■■□□□ 1.32
MECP2-216ENST00000627864 GPR101Q96P66 508 aaPredicted RBP23.31■■□□□ 1.32
MECP2-216ENST00000627864 RTFDC1Q9BY42 306 aaPredicted RBP23.31■■□□□ 1.32
MECP2-216ENST00000627864 ZNF277Q9NRM2 450 aaPredicted RBP23.31■■□□□ 1.32
MECP2-216ENST00000627864 ZNF804BA4D1E1 1349 aa23.31■■□□□ 1.32
MECP2-216ENST00000627864 LTBP3Q9NS15 1303 aa23.31■■□□□ 1.32
MECP2-216ENST00000627864 SASH1O94885 1247 aa23.3■■□□□ 1.32
MECP2-216ENST00000627864 PDE8BO95263 885 aa23.3■■□□□ 1.32
MECP2-216ENST00000627864 TFCP2Q12800 502 aa23.3■■□□□ 1.32
MECP2-216ENST00000627864 VGLL2Q8N8G2 317 aa23.3■■□□□ 1.32
MECP2-216ENST00000627864 APBB1O00213 710 aa23.29■■□□□ 1.32
MECP2-216ENST00000627864 RIMBP2O15034 1052 aa23.29■■□□□ 1.32
MECP2-216ENST00000627864 EYA3Q99504 573 aa23.29■■□□□ 1.32
MECP2-216ENST00000627864 RWDD1Q9H446 243 aaPredicted RBP23.29■■□□□ 1.32
MECP2-216ENST00000627864 HDAC1Q13547 482 aaPredicted RBP23.28■■□□□ 1.32
MECP2-216ENST00000627864 WASHC4Q2M389 1173 aa23.28■■□□□ 1.32
MECP2-216ENST00000627864 DCTPP1Q9H773 170 aa23.28■■□□□ 1.32
MECP2-216ENST00000627864 IARSP41252 1262 aaKnown RBP23.27■■□□□ 1.32
MECP2-216ENST00000627864 PRELPP51888 382 aa23.27■■□□□ 1.32
MECP2-216ENST00000627864 UBE4AQ14139 1066 aa23.27■■□□□ 1.32
MECP2-216ENST00000627864 AOC3Q16853 763 aa23.27■■□□□ 1.32
MECP2-216ENST00000627864 ERC1Q8IUD2 1116 aa23.27■■□□□ 1.32
MECP2-216ENST00000627864 ZC3H12CQ9C0D7 883 aaKnown RBP23.27■■□□□ 1.32
MECP2-216ENST00000627864 PPIP5K2O43314 1243 aa23.26■■□□□ 1.31
MECP2-216ENST00000627864 RAB11FIP3O75154 756 aa23.26■■□□□ 1.31
MECP2-216ENST00000627864 LMNB1P20700 586 aa23.26■■□□□ 1.31
MECP2-216ENST00000627864 PUM3Q15397 648 aaKnown RBP23.26■■□□□ 1.31
MECP2-216ENST00000627864 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.26■■□□□ 1.31
MECP2-216ENST00000627864 IGHDP01880 384 aa23.25■■□□□ 1.31
MECP2-216ENST00000627864 ATP2B3Q16720 1220 aa23.25■■□□□ 1.31
MECP2-216ENST00000627864 LARGE2Q8N3Y3 721 aa23.25■■□□□ 1.31
MECP2-216ENST00000627864 RHPN1Q8TCX5 695 aa23.25■■□□□ 1.31
MECP2-216ENST00000627864 VPS33BQ9H267 617 aa23.25■■□□□ 1.31
MECP2-216ENST00000627864 AKAP2Q9Y2D5 859 aa23.25■■□□□ 1.31
MECP2-216ENST00000627864 ARAP2Q8WZ64 1704 aa23.25■■□□□ 1.31
MECP2-216ENST00000627864 SLC5A1P13866 664 aa23.24■■□□□ 1.31
MECP2-216ENST00000627864 FGFR2P21802 821 aa23.24■■□□□ 1.31
MECP2-216ENST00000627864 KLRK1P26718 216 aa23.24■■□□□ 1.31
MECP2-216ENST00000627864 KIAA2012Q0VF49 1180 aa23.24■■□□□ 1.31
MECP2-216ENST00000627864 TXNRD3Q86VQ6 643 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms