RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 WASHC4Q2M389 1173 aa17.56■□□□□ 0.4
SNRPA1-216ENST00000626000 DUOX1Q9NRD9 1551 aa17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 IQCA1LA6NCM1 817 aa17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 GPSM2P81274 684 aa17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 GPC2Q8N158 579 aa17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 SUCLG2Q96I99 432 aa17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 ZC3H12CQ9C0D7 883 aaKnown RBP17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 LEMD3Q9Y2U8 911 aa17.55■□□□□ 0.4
SNRPA1-216ENST00000626000 SPEF2Q9C093 1822 aa17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 UFL1O94874 794 aa17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 VEGFAP15692 232 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 AOC3Q16853 763 aa17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 C16orf71Q8IYS4 520 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 TBC1D16Q8TBP0 767 aa17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 BICC1Q9H694 974 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 RCAN3Q9UKA8 241 aa17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 MINPP1Q9UNW1 487 aa17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 WDR90Q96KV7 1748 aa17.54■□□□□ 0.4
SNRPA1-216ENST00000626000 G3V3G9 751 aa17.53■□□□□ 0.4
SNRPA1-216ENST00000626000 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-216ENST00000626000 DCAF8Q5TAQ9 597 aa17.53■□□□□ 0.4
SNRPA1-216ENST00000626000 LDHAL6AQ6ZMR3 332 aa17.53■□□□□ 0.4
SNRPA1-216ENST00000626000 DZIP1LQ8IYY4 767 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-216ENST00000626000 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-216ENST00000626000 MED23Q9ULK4 1368 aa17.53■□□□□ 0.4
SNRPA1-216ENST00000626000 SCN4AP35499 1836 aa17.52■□□□□ 0.4
SNRPA1-216ENST00000626000 TNIP1Q15025 636 aa17.52■□□□□ 0.4
SNRPA1-216ENST00000626000 EPHA10Q5JZY3 1008 aa17.52■□□□□ 0.4
SNRPA1-216ENST00000626000 KAZALD1Q96I82 304 aa17.52■□□□□ 0.4
SNRPA1-216ENST00000626000 L3MBTL3Q96JM7 780 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-216ENST00000626000 CNNM1Q9NRU3 951 aa17.52■□□□□ 0.4
SNRPA1-216ENST00000626000 FBXO3Q9UK99 471 aa17.52■□□□□ 0.4
SNRPA1-216ENST00000626000 KCNJ4P48050 445 aa17.51■□□□□ 0.39
SNRPA1-216ENST00000626000 POLLQ9UGP5 575 aa17.51■□□□□ 0.39
SNRPA1-216ENST00000626000 COL4A1P02462 1669 aa17.51■□□□□ 0.39
SNRPA1-216ENST00000626000 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
SNRPA1-216ENST00000626000 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
SNRPA1-216ENST00000626000 CLUAP1Q96AJ1 413 aa17.5■□□□□ 0.39
SNRPA1-216ENST00000626000 TOMM70O94826 608 aa17.49■□□□□ 0.39
SNRPA1-216ENST00000626000 GNAI2P04899 355 aa17.49■□□□□ 0.39
SNRPA1-216ENST00000626000 LMOD1P29536 600 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-216ENST00000626000 C1QTNF8P60827 252 aa17.49■□□□□ 0.39
SNRPA1-216ENST00000626000 CHRNDQ07001 517 aa17.49■□□□□ 0.39
SNRPA1-216ENST00000626000 NMRK2Q9NPI5 230 aa17.49■□□□□ 0.39
SNRPA1-216ENST00000626000 ZNF804BA4D1E1 1349 aa17.48■□□□□ 0.39
SNRPA1-216ENST00000626000 ZNF541Q9H0D2 1346 aa17.48■□□□□ 0.39
SNRPA1-216ENST00000626000 KIF3CO14782 793 aa17.48■□□□□ 0.39
SNRPA1-216ENST00000626000 DDNO94850 711 aaPredicted RBP17.48■□□□□ 0.39
SNRPA1-216ENST00000626000 CIAPIN1Q6FI81 312 aa17.48■□□□□ 0.39
SNRPA1-216ENST00000626000 PODNQ7Z5L7 613 aa17.48■□□□□ 0.39
SNRPA1-216ENST00000626000 MEIS3Q99687 375 aa17.48■□□□□ 0.39
SNRPA1-216ENST00000626000 MTX1Q13505 466 aa17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 C15orf52Q6ZUT6 534 aaKnown RBP17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 PNMA8AQ86V59 439 aaPredicted RBP17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 RBM46Q8TBY0 533 aaKnown RBP17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 RRAGCQ9HB90 399 aa17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 HACL1Q9UJ83 578 aa17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 LRRFIP2Q9Y608 721 aaKnown RBP17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 COL4A5P29400 1685 aa17.47■□□□□ 0.39
SNRPA1-216ENST00000626000 A0A1B0GUL6 1792 aa17.46■□□□□ 0.39
SNRPA1-216ENST00000626000 RIMBP2O15034 1052 aa17.46■□□□□ 0.39
SNRPA1-216ENST00000626000 ECE2O60344 883 aa17.46■□□□□ 0.39
SNRPA1-216ENST00000626000 RPS12P25398 132 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-216ENST00000626000 COA1Q9GZY4 146 aa17.46■□□□□ 0.39
SNRPA1-216ENST00000626000 CIAO1O76071 339 aa17.45■□□□□ 0.38
SNRPA1-216ENST00000626000 CXCL9Q07325 125 aa17.45■□□□□ 0.38
SNRPA1-216ENST00000626000 FSTL1Q12841 308 aa17.45■□□□□ 0.38
SNRPA1-216ENST00000626000 UBE4AQ14139 1066 aa17.45■□□□□ 0.38
SNRPA1-216ENST00000626000 PDE3AQ14432 1141 aa17.45■□□□□ 0.38
SNRPA1-216ENST00000626000 SLC51AQ86UW1 340 aa17.45■□□□□ 0.38
SNRPA1-216ENST00000626000 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
SNRPA1-216ENST00000626000 ZNF609O15014 1411 aa17.45■□□□□ 0.38
SNRPA1-216ENST00000626000 MMP14P50281 582 aa17.44■□□□□ 0.38
SNRPA1-216ENST00000626000 ZNF804AQ7Z570 1209 aa17.44■□□□□ 0.38
SNRPA1-216ENST00000626000 SMC1BQ8NDV3 1235 aa17.44■□□□□ 0.38
SNRPA1-216ENST00000626000 ZNF594Q96JF6 807 aaPredicted RBP17.44■□□□□ 0.38
SNRPA1-216ENST00000626000 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
SNRPA1-216ENST00000626000 DDX19BQ9UMR2 479 aa17.44■□□□□ 0.38
SNRPA1-216ENST00000626000 RIPOR2Q9Y4F9 1068 aa17.44■□□□□ 0.38
SNRPA1-216ENST00000626000 PSME4Q14997 1843 aa17.43■□□□□ 0.38
SNRPA1-216ENST00000626000 EYA2O00167 538 aa17.43■□□□□ 0.38
SNRPA1-216ENST00000626000 METTL24Q5JXM2 366 aa17.43■□□□□ 0.38
SNRPA1-216ENST00000626000 DPF2Q92785 391 aa17.43■□□□□ 0.38
SNRPA1-216ENST00000626000 YTHDC1Q96MU7 727 aaKnown RBP17.43■□□□□ 0.38
SNRPA1-216ENST00000626000 COPRSQ9NQ92 184 aa17.43■□□□□ 0.38
SNRPA1-216ENST00000626000 MYO3BQ8WXR4 1341 aa17.43■□□□□ 0.38
SNRPA1-216ENST00000626000 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
SNRPA1-216ENST00000626000 PDE8BO95263 885 aa17.42■□□□□ 0.38
SNRPA1-216ENST00000626000 TAF1DQ9H5J8 278 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-216ENST00000626000 YDJCA8MPS7 323 aa17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 RAD17O75943 681 aa17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 EPHX2P34913 555 aa17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 RFX5P48382 616 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 PTPN12Q05209 780 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 367.1 ms