RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 STOX1Q6ZVD7 989 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 BICD2Q8TD16 824 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 NR1I2O75469 434 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 SCRN1Q12765 414 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 ANO6Q4KMQ2 910 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 DDX19AQ9NUU7 478 aaKnown RBP13.31□□□□□ -0.28
VARS2-213ENST00000625423 SPTLC3Q9NUV7 552 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 MST1RQ04912 1400 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 GOLIM4O00461 696 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 FOXO4P98177 505 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 PYCARDQ9ULZ3 195 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 TIMM10P62072 90 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 MYRIPQ8NFW9 859 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 CLSTN2Q9H4D0 955 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 CBX8Q9HC52 389 aa13.3□□□□□ -0.28
VARS2-213ENST00000625423 ATG9AQ7Z3C6 839 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 NBPF26B4DH59 902 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 FOSBP53539 338 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 NBPF14Q5TI25 921 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 NBPF10Q6P3W6 841 aaKnown RBP13.29□□□□□ -0.28
VARS2-213ENST00000625423 NBPF15Q8N660 670 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 KIAA1524Q8TCG1 905 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 ALS2Q96Q42 1657 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 SH3TC1Q8TE82 1336 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 H7C1W4 665 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 CEBPZQ03701 1054 aaKnown RBP13.29□□□□□ -0.28
VARS2-213ENST00000625423 TTLL7Q6ZT98 887 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 KIF1AQ12756 1690 aa13.29□□□□□ -0.28
VARS2-213ENST00000625423 GOLGA6L6A8MZA4 724 aa13.28□□□□□ -0.28
VARS2-213ENST00000625423 RBM43Q6ZSC3 357 aaKnown RBP13.28□□□□□ -0.28
VARS2-213ENST00000625423 PRIMPOLQ96LW4 560 aa13.28□□□□□ -0.28
VARS2-213ENST00000625423 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
VARS2-213ENST00000625423 A0A0G2JLW4 131 aa13.28□□□□□ -0.28
VARS2-213ENST00000625423 TPM3P06753 285 aa13.28□□□□□ -0.28
VARS2-213ENST00000625423 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
VARS2-213ENST00000625423 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
VARS2-213ENST00000625423 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
VARS2-213ENST00000625423 PFKFB2O60825 505 aa13.28□□□□□ -0.28
VARS2-213ENST00000625423 ZSCAN16Q9H4T2 348 aaPredicted RBP13.28□□□□□ -0.28
VARS2-213ENST00000625423 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.28
VARS2-213ENST00000625423 PPFIA3O75145 1194 aa13.27□□□□□ -0.28
VARS2-213ENST00000625423 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.28
VARS2-213ENST00000625423 LRRC24Q50LG9 513 aa13.27□□□□□ -0.28
VARS2-213ENST00000625423 NSUN7Q8NE18 718 aaKnown RBP13.27□□□□□ -0.28
VARS2-213ENST00000625423 TSC1Q92574 1164 aa13.27□□□□□ -0.28
VARS2-213ENST00000625423 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.28
VARS2-213ENST00000625423 HMGB1P09429 215 aaKnown RBP13.27□□□□□ -0.29
VARS2-213ENST00000625423 PTGS1P23219 599 aa13.27□□□□□ -0.29
VARS2-213ENST00000625423 HELLSQ9NRZ9 838 aa13.27□□□□□ -0.29
VARS2-213ENST00000625423 CWC25Q9NXE8 425 aaPredicted RBP13.27□□□□□ -0.29
VARS2-213ENST00000625423 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
VARS2-213ENST00000625423 ARFGEF2Q9Y6D5 1785 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 CTDNEP1O95476 244 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 HMGN5P82970 282 aaKnown RBP13.26□□□□□ -0.29
VARS2-213ENST00000625423 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
VARS2-213ENST00000625423 DNAJC25Q9H1X3 360 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 CFAP45Q9UL16 551 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 A1BGP04217 495 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 LLPHQ9BRT6 129 aaKnown RBP13.26□□□□□ -0.29
VARS2-213ENST00000625423 DSCC1Q9BVC3 393 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 ZBTB3Q9H5J0 574 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 NAP1L2Q9ULW6 460 aaPredicted RBP13.26□□□□□ -0.29
VARS2-213ENST00000625423 PTPDC1A2A3K4 754 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
VARS2-213ENST00000625423 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
VARS2-213ENST00000625423 ZNF165P49910 485 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 ZMYM1Q5SVZ6 1142 aa13.26□□□□□ -0.29
VARS2-213ENST00000625423 NCOA5Q9HCD5 579 aaKnown RBP13.26□□□□□ -0.29
VARS2-213ENST00000625423 ADD1P35611 737 aaKnown RBP13.25□□□□□ -0.29
VARS2-213ENST00000625423 EXOSC10Q01780 885 aaKnown RBP13.25□□□□□ -0.29
VARS2-213ENST00000625423 CHST3Q7LGC8 479 aa13.25□□□□□ -0.29
VARS2-213ENST00000625423 DRC7Q8IY82 874 aa13.25□□□□□ -0.29
VARS2-213ENST00000625423 TRIM5Q9C035 493 aa13.25□□□□□ -0.29
VARS2-213ENST00000625423 E7EWF7 191 aa13.25□□□□□ -0.29
VARS2-213ENST00000625423 IFIT1P09914 478 aaKnown RBP13.25□□□□□ -0.29
VARS2-213ENST00000625423 CCDC186Q7Z3E2 898 aa13.25□□□□□ -0.29
VARS2-213ENST00000625423 GPR108Q9NPR9 543 aa13.25□□□□□ -0.29
VARS2-213ENST00000625423 COL18A1P39060 1754 aa13.25□□□□□ -0.29
VARS2-213ENST00000625423 EYA2O00167 538 aa13.24□□□□□ -0.29
VARS2-213ENST00000625423 TDRD7Q8NHU6 1098 aaKnown RBP13.24□□□□□ -0.29
VARS2-213ENST00000625423 PUS3Q9BZE2 481 aaKnown RBP13.24□□□□□ -0.29
VARS2-213ENST00000625423 NRBP1Q9UHY1 535 aa13.24□□□□□ -0.29
VARS2-213ENST00000625423 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
VARS2-213ENST00000625423 NAA16Q6N069 864 aaPredicted RBP13.24□□□□□ -0.29
VARS2-213ENST00000625423 MAST3O60307 1309 aa13.24□□□□□ -0.29
VARS2-213ENST00000625423 TMEM94Q12767 1356 aa13.24□□□□□ -0.29
VARS2-213ENST00000625423 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.24□□□□□ -0.29
VARS2-213ENST00000625423 ZNF75DP51815 510 aa13.24□□□□□ -0.29
VARS2-213ENST00000625423 MTERF4Q7Z6M4 381 aaKnown RBP13.24□□□□□ -0.29
VARS2-213ENST00000625423 FAM177BA6PVY3 158 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 RNF113AO15541 343 aaKnown RBP13.23□□□□□ -0.29
VARS2-213ENST00000625423 GTF2F1P35269 517 aaKnown RBP eCLIP13.23□□□□□ -0.29
VARS2-213ENST00000625423 GUCY1B3Q02153 619 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 TTLL5Q6EMB2 1281 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms