RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 SEC31BQ9NQW1 1179 aa24.54■■□□□ 1.52
SMN1-211ENST00000625245 KCNQ5Q9NR82 932 aa24.54■■□□□ 1.52
SMN1-211ENST00000625245 JARID2Q92833 1246 aaPredicted RBP24.53■■□□□ 1.52
SMN1-211ENST00000625245 ZC3H12CQ9C0D7 883 aaKnown RBP24.53■■□□□ 1.52
SMN1-211ENST00000625245 G3V3G9 751 aa24.52■■□□□ 1.52
SMN1-211ENST00000625245 HSP90B1P14625 803 aaKnown RBP24.52■■□□□ 1.52
SMN1-211ENST00000625245 DCAF8Q5TAQ9 597 aa24.52■■□□□ 1.52
SMN1-211ENST00000625245 DLK2Q6UY11 383 aa24.52■■□□□ 1.52
SMN1-211ENST00000625245 ABHD8Q96I13 439 aa24.52■■□□□ 1.52
SMN1-211ENST00000625245 C8orf58Q8NAV2 365 aa24.51■■□□□ 1.51
SMN1-211ENST00000625245 HHIPL1Q96JK4 782 aa24.51■■□□□ 1.51
SMN1-211ENST00000625245 CCDC85AQ96PX6 553 aaPredicted RBP24.51■■□□□ 1.51
SMN1-211ENST00000625245 ANKIB1Q9P2G1 1089 aa24.51■■□□□ 1.51
SMN1-211ENST00000625245 RPS12P25398 132 aaKnown RBP24.5■■□□□ 1.51
SMN1-211ENST00000625245 CCDC191Q8NCU4 936 aa24.5■■□□□ 1.51
SMN1-211ENST00000625245 UFL1O94874 794 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 EGFRP00533 1210 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 CCDC152Q4G0S7 254 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 KRT26Q7Z3Y9 468 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 CWC25Q9NXE8 425 aaPredicted RBP24.49■■□□□ 1.51
SMN1-211ENST00000625245 RTL9Q8NET4 1388 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 DDX58O95786 925 aaKnown RBP24.48■■□□□ 1.51
SMN1-211ENST00000625245 PCCAP05165 728 aaPredicted RBP24.48■■□□□ 1.51
SMN1-211ENST00000625245 HUNKP57058 714 aa24.48■■□□□ 1.51
SMN1-211ENST00000625245 DCPSQ96C86 337 aaKnown RBP24.48■■□□□ 1.51
SMN1-211ENST00000625245 GGA1Q9UJY5 639 aa24.48■■□□□ 1.51
SMN1-211ENST00000625245 SCN9AQ15858 1988 aa24.47■■□□□ 1.51
SMN1-211ENST00000625245 PDE8AO60658 829 aa24.47■■□□□ 1.51
SMN1-211ENST00000625245 CCDC30Q5VVM6 783 aa24.47■■□□□ 1.51
SMN1-211ENST00000625245 METTL22Q9BUU2 404 aaPredicted RBP24.47■■□□□ 1.51
SMN1-211ENST00000625245 PODXL2Q9NZ53 605 aa24.47■■□□□ 1.51
SMN1-211ENST00000625245 CASP8AP2Q9UKL3 1982 aa24.46■■□□□ 1.51
SMN1-211ENST00000625245 ADM5C9JUS6 153 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 CA12O43570 354 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 VIL1P09327 827 aaKnown RBP24.45■■□□□ 1.5
SMN1-211ENST00000625245 BRPF1P55201 1214 aaPredicted RBP24.45■■□□□ 1.5
SMN1-211ENST00000625245 KIF4BQ2VIQ3 1234 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 CHMP4AQ9BY43 222 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 MAP3K2Q9Y2U5 619 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 CCDC85CA6NKD9 419 aa24.44■■□□□ 1.5
SMN1-211ENST00000625245 ANKRD18AQ8IVF6 992 aa24.44■■□□□ 1.5
SMN1-211ENST00000625245 C2orf69Q8N8R5 385 aa24.44■■□□□ 1.5
SMN1-211ENST00000625245 GBA2Q9HCG7 927 aaPredicted RBP24.44■■□□□ 1.5
SMN1-211ENST00000625245 NOGQ13253 232 aa24.43■■□□□ 1.5
SMN1-211ENST00000625245 TSPYL6Q8N831 410 aa24.43■■□□□ 1.5
SMN1-211ENST00000625245 ZIC5Q96T25 663 aa24.43■■□□□ 1.5
SMN1-211ENST00000625245 RGMBQ6NW40 437 aa24.41■■□□□ 1.5
SMN1-211ENST00000625245 SULF1Q8IWU6 871 aa24.41■■□□□ 1.5
SMN1-211ENST00000625245 GGA3Q9NZ52 723 aa24.41■■□□□ 1.5
SMN1-211ENST00000625245 XDHP47989 1333 aa24.4■■□□□ 1.5
SMN1-211ENST00000625245 PI4KAP2A4QPH2 592 aa24.4■■□□□ 1.5
SMN1-211ENST00000625245 RSBN1LQ6PCB5 846 aaPredicted RBP24.4■■□□□ 1.5
SMN1-211ENST00000625245 KSR2Q6VAB6 950 aa24.4■■□□□ 1.5
SMN1-211ENST00000625245 PI4KAP1Q8N8J0 262 aa24.4■■□□□ 1.5
SMN1-211ENST00000625245 TSR2Q969E8 191 aaKnown RBP24.4■■□□□ 1.5
SMN1-211ENST00000625245 ASTN2O75129 1339 aaPredicted RBP24.39■■□□□ 1.5
SMN1-211ENST00000625245 STK31Q9BXU1 1019 aa24.39■■□□□ 1.49
SMN1-211ENST00000625245 IGKV5-2P06315 115 aa24.38■■□□□ 1.49
SMN1-211ENST00000625245 ATP2B4P23634 1241 aa24.38■■□□□ 1.49
SMN1-211ENST00000625245 ZNF157P51786 506 aaPredicted RBP24.38■■□□□ 1.49
SMN1-211ENST00000625245 CTSWP56202 376 aa24.38■■□□□ 1.49
SMN1-211ENST00000625245 NEXNQ0ZGT2 675 aa24.38■■□□□ 1.49
SMN1-211ENST00000625245 CDC5LQ99459 802 aaKnown RBP24.38■■□□□ 1.49
SMN1-211ENST00000625245 SCARF1Q14162 830 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 AGBL3Q8NEM8 1001 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 CCDC102AQ96A19 550 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 SPEF2Q9C093 1822 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 MYH3P11055 1940 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 PSME4Q14997 1843 aa24.36■■□□□ 1.49
SMN1-211ENST00000625245 FAM155AB1AL88 458 aaPredicted RBP24.36■■□□□ 1.49
SMN1-211ENST00000625245 ZNF280AP59817 542 aaPredicted RBP24.36■■□□□ 1.49
SMN1-211ENST00000625245 ANGEL2Q5VTE6 544 aaKnown RBP24.36■■□□□ 1.49
SMN1-211ENST00000625245 TTLL11Q8NHH1 800 aa24.36■■□□□ 1.49
SMN1-211ENST00000625245 MCOLN1Q9GZU1 580 aa24.36■■□□□ 1.49
SMN1-211ENST00000625245 USP17L3A6NCW0 530 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 USP17L4A6NCW7 530 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 WTIPA6NIX2 430 aaPredicted RBP24.35■■□□□ 1.49
SMN1-211ENST00000625245 USP17L8P0C7I0 530 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 KIF23Q02241 960 aaPredicted RBP24.35■■□□□ 1.49
SMN1-211ENST00000625245 CWF19L2Q2TBE0 894 aaKnown RBP24.35■■□□□ 1.49
SMN1-211ENST00000625245 FAM161AQ3B820 660 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 USP17L1Q7RTZ2 530 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 CDCA5Q96FF9 252 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 GREM2Q9H772 168 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 CCDC184Q52MB2 194 aa24.34■■□□□ 1.49
SMN1-211ENST00000625245 PODNQ7Z5L7 613 aa24.34■■□□□ 1.49
SMN1-211ENST00000625245 MINPP1Q9UNW1 487 aa24.34■■□□□ 1.49
SMN1-211ENST00000625245 DGKZQ13574 1117 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 TWISTNBQ3B726 338 aaPredicted RBP24.33■■□□□ 1.49
SMN1-211ENST00000625245 G2E3Q7L622 706 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 FBXW7Q969H0 707 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 MYOZ2Q9NPC6 264 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 BSDC1Q9NW68 430 aaPredicted RBP24.33■■□□□ 1.49
SMN1-211ENST00000625245 AKAP11Q9UKA4 1901 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 NEURL1BA8MQ27 555 aa24.32■■□□□ 1.48
SMN1-211ENST00000625245 SLC4A2P04920 1241 aa24.32■■□□□ 1.48
SMN1-211ENST00000625245 UBE3BQ7Z3V4 1068 aa24.32■■□□□ 1.48
SMN1-211ENST00000625245 GMLQ99445 158 aa24.32■■□□□ 1.48
SMN1-211ENST00000625245 ZNF609O15014 1411 aa24.31■■□□□ 1.48
SMN1-211ENST00000625245 WWC1Q8IX03 1113 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms