RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 ZMYM1Q5SVZ6 1142 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 FOXD4L3Q6VB84 417 aaPredicted RBP3.86□□□□□ -1.79
U1.39-201ENST00000621562 CCDC129Q6ZRS4 1044 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 TTLL7Q6ZT98 887 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 UBE3BQ7Z3V4 1068 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 RIC3Q7Z5B4 369 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 NFATC2IPQ8NCF5 419 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 PLBD2Q8NHP8 589 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 SMARCC2Q8TAQ2 1214 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 RAPGEF4Q8WZA2 1011 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 DCAF5Q96JK2 942 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 TCEANC2Q96MN5 208 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 SEC62Q99442 399 aaKnown RBP3.86□□□□□ -1.79
U1.39-201ENST00000621562 HAUS7Q99871 368 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 FSD1Q9BTV5 496 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 BOLA2Q9H3K6 86 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 KCNF1Q9H3M0 494 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 GPR108Q9NPR9 543 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 SPTLC3Q9NUV7 552 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 NLRP2Q9NX02 1062 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 USP25Q9UHP3 1055 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 HDAC5Q9UQL6 1122 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 NDUFB9Q9Y6M9 179 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 MAST3O60307 1309 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 NEDD4P46934 1319 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 WDR17Q8IZU2 1322 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 BTAF1O14981 1849 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 BCL9LQ86UU0 1499 aa3.86□□□□□ -1.79
U1.39-201ENST00000621562 LY75O60449 1722 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 A0A0G2JLW4 131 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 VPS37CA5D8V6 355 aaPredicted RBP3.85□□□□□ -1.79
U1.39-201ENST00000621562 PFKFB2O60825 505 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 PHF14O94880 888 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 CTDNEP1O95476 244 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 CYP21A2P08686 494 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 ADD1P35611 737 aaKnown RBP3.85□□□□□ -1.79
U1.39-201ENST00000621562 EXOSC10Q01780 885 aaKnown RBP3.85□□□□□ -1.79
U1.39-201ENST00000621562 CHRNA2Q15822 529 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 SLFNL1Q499Z3 407 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 FAM173BQ6P4H8 233 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 GIMAP6Q6P9H5 292 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 BLOC1S2Q6QNY1 142 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 ANKRD13DQ6ZTN6 518 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 ILDR1Q86SU0 546 aaPredicted RBP3.85□□□□□ -1.79
U1.39-201ENST00000621562 TICAM2Q86XR7 235 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 KBTBD3Q8NAB2 608 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 NSUN7Q8NE18 718 aaKnown RBP3.85□□□□□ -1.79
U1.39-201ENST00000621562 CABLES1Q8TDN4 633 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 LEO1Q8WVC0 666 aaPredicted RBP3.85□□□□□ -1.79
U1.39-201ENST00000621562 UBE2Q2Q8WVN8 375 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 JARID2Q92833 1246 aaPredicted RBP3.85□□□□□ -1.79
U1.39-201ENST00000621562 BRF1Q92994 677 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 PGBD1Q96JS3 809 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 FMNL2Q96PY5 1086 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 ISCA1Q9BUE6 129 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 CLSTN2Q9H4D0 955 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 MRVI1Q9Y6F6 885 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 SOS2Q07890 1332 aaPredicted RBP3.85□□□□□ -1.79
U1.39-201ENST00000621562 PCDH11XQ9BZA7 1347 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 PCDH11YQ9BZA8 1340 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 CARMIL3Q8ND23 1372 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 ABCC12Q96J65 1359 aa3.85□□□□□ -1.79
U1.39-201ENST00000621562 ZNF646O15015 1829 aaPredicted RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 ARFGEF1Q9Y6D6 1849 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 A0A087WZG4 1122 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 ERVV-2B6SEH9 535 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 ATP5J2-PTCD1G3V325 749 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 M0R2C6 588 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 EYA2O00167 538 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 RRP9O43818 475 aaKnown RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 PTCD1O75127 700 aaKnown RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 KDM4AO75164 1064 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 LETM1O95202 739 aaPredicted RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 ADCY5O95622 1261 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 ZKSCAN1P17029 563 aaPredicted RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 MSNP26038 577 aaKnown RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 PSMA5P28066 241 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 EVCP57679 992 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 KRT85P78386 507 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 TYRO3Q06418 890 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 NEXNQ0ZGT2 675 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 SCRN1Q12765 414 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 KRT32Q14532 448 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 ANKRD1Q15327 319 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 LRRC24Q50LG9 513 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 LMOD2Q6P5Q4 547 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 SASS6Q6UVJ0 657 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 LMBR1LQ6UX01 489 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 Q6ZUG5 572 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 BRINP3Q76B58 766 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 DDX46Q7L014 1031 aaKnown RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 FERMT3Q86UX7 667 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 FBXL16Q8N461 479 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 TDRD7Q8NHU6 1098 aaKnown RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.84□□□□□ -1.79
U1.39-201ENST00000621562 PIBF1Q8WXW3 757 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 ANP32BQ92688 251 aaKnown RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 DSCC1Q9BVC3 393 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 PLA2G12BQ9BX93 195 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 PYCARDQ9ULZ3 195 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms