RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 RHPN1Q8TCX5 695 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 CTNNBL1Q8WYA6 563 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 H0YHG0 523 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 PRC1O43663 620 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 PHACTR2O75167 634 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 MTIF2P46199 727 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 TDRD12Q587J7 1177 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 SYCE3A1L190 88 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 HELBQ8NG08 1087 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 LINS1Q8NG48 757 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 IP6K1Q92551 441 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 SAMD9Q5K651 1589 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 GNAT2P19087 354 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 HOOK3Q86VS8 718 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 ERLIN1O75477 346 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 NAPAP54920 295 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 DPP8Q6V1X1 898 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 TNPO1Q92973 898 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 ANO10Q9NW15 660 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 ZBTB43O43298 467 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 EAPPQ56P03 285 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 GPHNQ9NQX3 736 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 CAMK4Q16566 473 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 SYNCQ9H7C4 482 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 GGA1Q9UJY5 639 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 DUOX2Q9NRD8 1548 aa11.23□□□□□ -0.61
CLTCL1-211ENST00000621271 KIF4AO95239 1232 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 RFX1P22670 979 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 CLCN1P35523 988 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 MTHFSDQ2M296 383 aaKnown RBP11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 PDCL2Q8N4E4 241 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 GSTTP1A0A1W2PQM5 241 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 BCS1LQ9Y276 419 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 ARHGEF10O15013 1369 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 MAST3O60307 1309 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 RTN1Q16799 776 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 ZNF354CQ86Y25 554 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 ZNF710Q8N1W2 664 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 TSPYL1Q9H0U9 437 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 TSPOAP1O95153 1857 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 ITSN2Q9NZM3 1697 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 CALM1P0DP23 149 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 CALM2P0DP24 149 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 CALM3P0DP25 149 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 FAM114A1Q8IWE2 563 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 FLAD1Q8NFF5 587 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 ORAI2Q96SN7 254 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 IMPG2Q9BZV3 1241 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 JAG2Q9Y219 1238 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 SH3TC1Q8TE82 1336 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 BACH1O14867 736 aa11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 RRP36Q96EU6 259 aaKnown RBP11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
CLTCL1-211ENST00000621271 RPRD2Q5VT52 1461 aaKnown RBP11.21□□□□□ -0.61
CLTCL1-211ENST00000621271 TAF3Q5VWG9 929 aa11.21□□□□□ -0.61
CLTCL1-211ENST00000621271 BMP15O95972 392 aa11.21□□□□□ -0.61
CLTCL1-211ENST00000621271 HOXC9P31274 260 aa11.21□□□□□ -0.61
CLTCL1-211ENST00000621271 PRIM1P49642 420 aaKnown RBP11.21□□□□□ -0.61
CLTCL1-211ENST00000621271 DENND2AQ9ULE3 1009 aa11.21□□□□□ -0.61
CLTCL1-211ENST00000621271 ZCCHC11Q5TAX3 1644 aaKnown RBP11.21□□□□□ -0.61
CLTCL1-211ENST00000621271 MAP3K5Q99683 1374 aa11.21□□□□□ -0.61
CLTCL1-211ENST00000621271 PLEKHH1Q9ULM0 1364 aa11.21□□□□□ -0.61
CLTCL1-211ENST00000621271 RAB3GAP1Q15042 981 aa11.21□□□□□ -0.62
CLTCL1-211ENST00000621271 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.62
CLTCL1-211ENST00000621271 NPATQ14207 1427 aa11.21□□□□□ -0.62
CLTCL1-211ENST00000621271 RNMTO43148 476 aaKnown RBP11.21□□□□□ -0.62
CLTCL1-211ENST00000621271 KRT13P13646 458 aa11.21□□□□□ -0.62
CLTCL1-211ENST00000621271 CALRP27797 417 aaKnown RBP11.21□□□□□ -0.62
CLTCL1-211ENST00000621271 LRRC45Q96CN5 670 aa11.21□□□□□ -0.62
CLTCL1-211ENST00000621271 SSX2IPQ9Y2D8 614 aa11.21□□□□□ -0.62
CLTCL1-211ENST00000621271 H7C1D1 291 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 KANK3Q6NY19 840 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 APBB1IPQ7Z5R6 666 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 TEX11Q8IYF3 940 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 MIGA1Q8NAN2 632 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 PODXL2Q9NZ53 605 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 PANK2Q9BZ23 570 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 EXOC1Q9NV70 894 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 SYCP2Q9BX26 1530 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 KAT6BQ8WYB5 2073 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 USO1O60763 962 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 ACTN2P35609 894 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 EYA1Q99502 592 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 NUP88Q99567 741 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 CCDC172P0C7W6 258 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 SSFA2P28290 1259 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 ALDH1B1P30837 517 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 LEKR1Q6ZMV7 388 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 MAGEB6Q8N7X4 407 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 FSIP1Q8NA03 581 aa11.2□□□□□ -0.62
CLTCL1-211ENST00000621271 CTAGE5O15320 804 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 YEATS4O95619 227 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 TNNT1P13805 278 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 274.4 ms