RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 F13A1P00488 732 aa10.64□□□□□ -0.71
GGA3-222ENST00000621217 ITGA6P23229 1130 aa10.64□□□□□ -0.71
GGA3-222ENST00000621217 CCDC183Q5T5S1 534 aa10.64□□□□□ -0.71
GGA3-222ENST00000621217 CCAR2Q8N163 923 aaKnown RBP10.64□□□□□ -0.71
GGA3-222ENST00000621217 NOC3LQ8WTT2 800 aaKnown RBP10.64□□□□□ -0.71
GGA3-222ENST00000621217 CCDC171Q6TFL3 1326 aa10.64□□□□□ -0.71
GGA3-222ENST00000621217 SNAP23O00161 211 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 POLR3DP05423 398 aaPredicted RBP10.63□□□□□ -0.71
GGA3-222ENST00000621217 SLFNL1Q499Z3 407 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 EPHA10Q5JZY3 1008 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 ISM2Q6H9L7 571 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 Q6ZUG5 572 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 FILIP1Q7Z7B0 1213 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 IL25Q9H293 177 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 CGNQ9P2M7 1197 aaKnown RBP10.63□□□□□ -0.71
GGA3-222ENST00000621217 RAD50Q92878 1312 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 TRIM29Q14134 588 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 BABAM1Q9NWV8 329 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 CDC42BPGQ6DT37 1551 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 COL3A1P02461 1466 aaPredicted RBP10.63□□□□□ -0.71
GGA3-222ENST00000621217 ADCY5O95622 1261 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 HSPA4P34932 840 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 SLC9C2Q5TAH2 1124 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 GNL3LQ9NVN8 582 aaKnown RBP10.63□□□□□ -0.71
GGA3-222ENST00000621217 DIP2AQ14689 1571 aa10.63□□□□□ -0.71
GGA3-222ENST00000621217 USP31Q70CQ4 1352 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 C6orf229H3BNL8 230 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 IL15P40933 162 aaPredicted RBP10.62□□□□□ -0.71
GGA3-222ENST00000621217 VPS53Q5VIR6 699 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 MIGA1Q8NAN2 632 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 SETDB2Q96T68 719 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 SH2B1Q9NRF2 756 aaPredicted RBP10.62□□□□□ -0.71
GGA3-222ENST00000621217 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 TNNI3KQ59H18 835 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 C17orf53Q8N3J3 647 aaPredicted RBP10.62□□□□□ -0.71
GGA3-222ENST00000621217 FPGT-TNNI3KV9GXZ4 949 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 KDM4FA0A1W2PPD8 638 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 LARGE1O95461 756 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 APOBRQ0VD83 1088 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 NCOA5Q9HCD5 579 aaKnown RBP10.62□□□□□ -0.71
GGA3-222ENST00000621217 TTC41PQ6P2S7 1318 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 DYNC1I1O14576 645 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 KCNQ2O43526 872 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 IGKV5-2P06315 115 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 RXRAP19793 462 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 RUFY3Q7L099 469 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 NAPBQ9H115 298 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 PAG1Q9NWQ8 432 aa10.62□□□□□ -0.71
GGA3-222ENST00000621217 ERVV-2B6SEH9 535 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 BIN1O00499 593 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 JAK2O60674 1132 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 CHGBP05060 677 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 RBM5P52756 815 aaKnown RBP eCLIP10.61□□□□□ -0.715e-10■■■■□ 19.6
GGA3-222ENST00000621217 IMMTQ16891 758 aaKnown RBP10.61□□□□□ -0.71
GGA3-222ENST00000621217 UTP14AQ9BVJ6 771 aaKnown RBP10.61□□□□□ -0.71
GGA3-222ENST00000621217 DACT1Q9NYF0 836 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 CCNL1Q9UK58 526 aaPredicted RBP10.61□□□□□ -0.71
GGA3-222ENST00000621217 MED14O60244 1454 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 KIF24Q5T7B8 1368 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 EYA2O00167 538 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 SLC27A2O14975 620 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 SLC5A1P13866 664 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 KRT32Q14532 448 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 MNS1Q8NEH6 495 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 AK9Q5TCS8 1911 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 F8W031 263 aaPredicted RBP10.61□□□□□ -0.71
GGA3-222ENST00000621217 PES1O00541 588 aaKnown RBP10.61□□□□□ -0.71
GGA3-222ENST00000621217 UBE2HP62256 183 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 ME3Q16798 604 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 CAVIN4Q5BKX8 364 aa10.61□□□□□ -0.71
GGA3-222ENST00000621217 CEP170BQ9Y4F5 1589 aaPredicted RBP10.61□□□□□ -0.71
GGA3-222ENST00000621217 SHPRHQ149N8 1683 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 FSD2A1L4K1 749 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 ZNF213O14771 459 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 CRB1P82279 1406 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 DLC1Q96QB1 1528 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 BRD1O95696 1058 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 PI16Q6UXB8 463 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 CCDC191Q8NCU4 936 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 OSBPL3Q9H4L5 887 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 U3KPZ7 1027 aaPredicted RBP10.6□□□□□ -0.71
GGA3-222ENST00000621217 SMC2O95347 1197 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 TCIRG1Q13488 830 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 HLFQ16534 295 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 OTUD7BQ6GQQ9 843 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 CDC37L1Q7L3B6 337 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 MICU3Q86XE3 530 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 AMOTL1Q8IY63 956 aa10.6□□□□□ -0.71
GGA3-222ENST00000621217 RTCBQ9Y3I0 505 aaKnown RBP10.6□□□□□ -0.71
GGA3-222ENST00000621217 LOC102724428A0A0B4J2F2 783 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 RANBP6O60518 1105 aaKnown RBP10.59□□□□□ -0.71
GGA3-222ENST00000621217 SIK1P57059 783 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 MAP3K12Q12852 859 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 CCDC152Q4G0S7 254 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 MCMDC2Q4G0Z9 681 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 PI4K2BQ8TCG2 481 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 ERCC4Q92889 916 aaPredicted RBP10.59□□□□□ -0.71
GGA3-222ENST00000621217 NLRP3Q96P20 1036 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 NACAP1Q9BZK3 213 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 227.2 ms