RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 DTNBO60941 627 aa16.12■□□□□ 0.17
CNOT3-210ENST00000618939 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
CNOT3-210ENST00000618939 FAM173BQ6P4H8 233 aa16.12■□□□□ 0.17
CNOT3-210ENST00000618939 SLC52A2Q9HAB3 445 aa16.12■□□□□ 0.17
CNOT3-210ENST00000618939 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
CNOT3-210ENST00000618939 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
CNOT3-210ENST00000618939 CCDC129Q6ZRS4 1044 aa16.12■□□□□ 0.17
CNOT3-210ENST00000618939 CDK5RAP3Q96JB5 506 aa16.12■□□□□ 0.17
CNOT3-210ENST00000618939 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
CNOT3-210ENST00000618939 NAP1L1P55209 391 aaKnown RBP16.12■□□□□ 0.17
CNOT3-210ENST00000618939 TIMM10P62072 90 aa16.12■□□□□ 0.17
CNOT3-210ENST00000618939 PRC1O43663 620 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
CNOT3-210ENST00000618939 TMC6Q7Z403 805 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 IQCA1Q86XH1 822 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 PLBD2Q8NHP8 589 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 MED14O60244 1454 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
CNOT3-210ENST00000618939 PPRC1Q5VV67 1664 aaKnown RBP16.11■□□□□ 0.17
CNOT3-210ENST00000618939 SLC9C2Q5TAH2 1124 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 UBXN4Q92575 508 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 A2ML1A8K2U0 1454 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 SLC26A6Q9BXS9 759 aa16.11■□□□□ 0.17
CNOT3-210ENST00000618939 KLHL10Q6JEL2 608 aa16.1■□□□□ 0.17
CNOT3-210ENST00000618939 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
CNOT3-210ENST00000618939 CAGE1Q8TC20 777 aa16.1■□□□□ 0.17
CNOT3-210ENST00000618939 ALG1Q9BT22 464 aa16.1■□□□□ 0.17
CNOT3-210ENST00000618939 ZBTB43O43298 467 aa16.1■□□□□ 0.17
CNOT3-210ENST00000618939 ISM2Q6H9L7 571 aa16.1■□□□□ 0.17
CNOT3-210ENST00000618939 CTCFLQ8NI51 663 aaPredicted RBP16.1■□□□□ 0.17
CNOT3-210ENST00000618939 CHAMP1Q96JM3 812 aa16.1■□□□□ 0.17
CNOT3-210ENST00000618939 IL2RBP14784 551 aa16.1■□□□□ 0.17
CNOT3-210ENST00000618939 ZNHIT6Q9NWK9 470 aaKnown RBP16.1■□□□□ 0.17
CNOT3-210ENST00000618939 INO80Q9ULG1 1556 aaPredicted RBP16.1■□□□□ 0.17
CNOT3-210ENST00000618939 ALKQ9UM73 1620 aa16.1■□□□□ 0.17
CNOT3-210ENST00000618939 IQGAP1P46940 1657 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 NLRP1Q9C000 1473 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 EYA2O00167 538 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 SYKP43405 635 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 CCDC102BQ68D86 513 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 EAF2Q96CJ1 260 aaPredicted RBP16.09■□□□□ 0.17
CNOT3-210ENST00000618939 ZSCAN12O43309 604 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 CEP89Q96ST8 783 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 HELLSQ9NRZ9 838 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 LRRC7Q96NW7 1537 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 PTH1RQ03431 593 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 MEX3CQ5U5Q3 659 aaKnown RBP16.09■□□□□ 0.17
CNOT3-210ENST00000618939 LUZP1Q86V48 1076 aa16.09■□□□□ 0.17
CNOT3-210ENST00000618939 KDRP35968 1356 aa16.08■□□□□ 0.17
CNOT3-210ENST00000618939 RGS12O14924 1447 aa16.08■□□□□ 0.17
CNOT3-210ENST00000618939 A0A1B0GUL7 405 aa16.08■□□□□ 0.16
CNOT3-210ENST00000618939 GPT2Q8TD30 523 aa16.08■□□□□ 0.16
CNOT3-210ENST00000618939 NEURL1BA8MQ27 555 aa16.08■□□□□ 0.16
CNOT3-210ENST00000618939 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.16
CNOT3-210ENST00000618939 NDUFB9Q9Y6M9 179 aa16.08■□□□□ 0.16
CNOT3-210ENST00000618939 SPTLC2O15270 562 aa16.07■□□□□ 0.16
CNOT3-210ENST00000618939 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
CNOT3-210ENST00000618939 PPP1R9BQ96SB3 815 aa16.07■□□□□ 0.16
CNOT3-210ENST00000618939 ME3Q16798 604 aa16.07■□□□□ 0.16
CNOT3-210ENST00000618939 EPS15P42566 896 aa16.07■□□□□ 0.16
CNOT3-210ENST00000618939 CBX1P83916 185 aa16.07■□□□□ 0.16
CNOT3-210ENST00000618939 CATIPQ7Z7H3 387 aa16.07■□□□□ 0.16
CNOT3-210ENST00000618939 EDC3Q96F86 508 aaKnown RBP16.07■□□□□ 0.16
CNOT3-210ENST00000618939 CDC5LQ99459 802 aaKnown RBP16.07■□□□□ 0.16
CNOT3-210ENST00000618939 PCDH11XQ9BZA7 1347 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 PCDH11YQ9BZA8 1340 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 URI1O94763 535 aaPredicted RBP16.06■□□□□ 0.16
CNOT3-210ENST00000618939 SKILP12757 684 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 PTGS1P23219 599 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 ARHGAP29Q52LW3 1261 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 ERCC4Q92889 916 aaPredicted RBP16.06■□□□□ 0.16
CNOT3-210ENST00000618939 KAT6BQ8WYB5 2073 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 MARCKSP29966 332 aaPredicted RBP16.06■□□□□ 0.16
CNOT3-210ENST00000618939 CDC37L1Q7L3B6 337 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 RASEFQ8IZ41 740 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 ADAMTS2O95450 1211 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 ATP5JP18859 108 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 WTAPQ15007 396 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 CCDC150Q8NCX0 1101 aa16.06■□□□□ 0.16
CNOT3-210ENST00000618939 IKQ13123 557 aaPredicted RBP16.05■□□□□ 0.16
CNOT3-210ENST00000618939 CEP135Q66GS9 1140 aa16.05■□□□□ 0.16
CNOT3-210ENST00000618939 LSG1Q9H089 658 aaKnown RBP16.05■□□□□ 0.16
CNOT3-210ENST00000618939 A0A0D9SFI3 127 aa16.05■□□□□ 0.16
CNOT3-210ENST00000618939 CCDC191Q8NCU4 936 aa16.05■□□□□ 0.16
CNOT3-210ENST00000618939 PAXBP1Q9Y5B6 917 aa16.05■□□□□ 0.16
CNOT3-210ENST00000618939 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
CNOT3-210ENST00000618939 SNW1Q13573 536 aaKnown RBP16.05■□□□□ 0.16
CNOT3-210ENST00000618939 CUL4AQ13619 759 aa16.05■□□□□ 0.16
CNOT3-210ENST00000618939 RUFY1Q96T51 708 aa16.05■□□□□ 0.16
CNOT3-210ENST00000618939 KRT23Q9C075 422 aa16.05■□□□□ 0.16
CNOT3-210ENST00000618939 KIAA1210Q9ULL0 1709 aa16.05■□□□□ 0.16
CNOT3-210ENST00000618939 USP5P45974 858 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 PROSER3Q2NL68 480 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 LEO1Q8WVC0 666 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-210ENST00000618939 LLPHQ9BRT6 129 aaKnown RBP16.04■□□□□ 0.16
CNOT3-210ENST00000618939 ZSWIM6Q9HCJ5 1215 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 CCDC66A2RUB6 948 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 A1BGP04217 495 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms