RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 UBASH3AP57075 661 aa20.26■□□□□ 0.83
ATXN2-227ENST00000616825 RRAGBQ5VZM2 374 aa20.26■□□□□ 0.83
ATXN2-227ENST00000616825 PUS7Q96PZ0 661 aaKnown RBP20.25■□□□□ 0.83
ATXN2-227ENST00000616825 PLVAPQ9BX97 442 aa20.25■□□□□ 0.83
ATXN2-227ENST00000616825 JADE2Q9NQC1 790 aa20.25■□□□□ 0.83
ATXN2-227ENST00000616825 TRIM75PA6NK02 468 aa20.25■□□□□ 0.83
ATXN2-227ENST00000616825 PSMA7O14818 248 aa20.25■□□□□ 0.83
ATXN2-227ENST00000616825 AFMP43652 599 aa20.25■□□□□ 0.83
ATXN2-227ENST00000616825 DHX37Q8IY37 1157 aaKnown RBP20.25■□□□□ 0.83
ATXN2-227ENST00000616825 NFATC2IPQ8NCF5 419 aa20.25■□□□□ 0.83
ATXN2-227ENST00000616825 STAT6P42226 847 aa20.25■□□□□ 0.83
ATXN2-227ENST00000616825 IFI16Q16666 785 aaKnown RBP20.25■□□□□ 0.83
ATXN2-227ENST00000616825 UTP14AQ9BVJ6 771 aaKnown RBP20.25■□□□□ 0.83
ATXN2-227ENST00000616825 BCCIPQ9P287 314 aaKnown RBP eCLIP20.25■□□□□ 0.83
ATXN2-227ENST00000616825 CGNQ9P2M7 1197 aaKnown RBP20.25■□□□□ 0.83
ATXN2-227ENST00000616825 UBAP1LF5GYI3 381 aa20.24■□□□□ 0.83
ATXN2-227ENST00000616825 IL2RBP14784 551 aa20.24■□□□□ 0.83
ATXN2-227ENST00000616825 MTHFSDQ2M296 383 aaKnown RBP20.24■□□□□ 0.83
ATXN2-227ENST00000616825 PAG1Q9NWQ8 432 aa20.24■□□□□ 0.83
ATXN2-227ENST00000616825 F8W031 263 aaPredicted RBP20.24■□□□□ 0.83
ATXN2-227ENST00000616825 CALML3P27482 149 aa20.24■□□□□ 0.83
ATXN2-227ENST00000616825 Q6ZUG5 572 aa20.24■□□□□ 0.83
ATXN2-227ENST00000616825 BICD1Q96G01 975 aa20.24■□□□□ 0.83
ATXN2-227ENST00000616825 PA2G4Q9UQ80 394 aaKnown RBP20.24■□□□□ 0.83
ATXN2-227ENST00000616825 FSD2A1L4K1 749 aa20.24■□□□□ 0.83
ATXN2-227ENST00000616825 HEATR3Q7Z4Q2 680 aa20.24■□□□□ 0.83
ATXN2-227ENST00000616825 CTAGE1Q96RT6 745 aa20.24■□□□□ 0.83
ATXN2-227ENST00000616825 CCDC175P0C221 793 aa20.23■□□□□ 0.83
ATXN2-227ENST00000616825 DZIP3Q86Y13 1208 aaKnown RBP20.23■□□□□ 0.83
ATXN2-227ENST00000616825 FERMT1Q9BQL6 677 aa20.23■□□□□ 0.83
ATXN2-227ENST00000616825 TMX1Q9H3N1 280 aa20.23■□□□□ 0.83
ATXN2-227ENST00000616825 FLT4P35916 1363 aa20.23■□□□□ 0.83
ATXN2-227ENST00000616825 TTC41PQ6P2S7 1318 aa20.23■□□□□ 0.83
ATXN2-227ENST00000616825 NSFL1CQ9UNZ2 370 aaKnown RBP20.23■□□□□ 0.83
ATXN2-227ENST00000616825 CYLC1P35663 651 aaPredicted RBP20.23■□□□□ 0.83
ATXN2-227ENST00000616825 C19orf44Q9H6X5 657 aa20.23■□□□□ 0.83
ATXN2-227ENST00000616825 DACT1Q9NYF0 836 aa20.23■□□□□ 0.83
ATXN2-227ENST00000616825 PLCG2P16885 1265 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 FAM200AQ8TCP9 573 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 DCTPP1Q9H773 170 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 VAMP4O75379 141 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 GNAT2P19087 354 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 NAPAP54920 295 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 NYXQ9GZU5 481 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 C6orf50Q9HD87 102 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 PODXL2Q9NZ53 605 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.22■□□□□ 0.831e-6■■□□□ 12.1
ATXN2-227ENST00000616825 LRSAM1Q6UWE0 723 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 ZNF804AQ7Z570 1209 aa20.22■□□□□ 0.83
ATXN2-227ENST00000616825 LRRC59Q96AG4 307 aaKnown RBP20.22■□□□□ 0.83
ATXN2-227ENST00000616825 CALM1P0DP23 149 aa20.21■□□□□ 0.83
ATXN2-227ENST00000616825 CALM2P0DP24 149 aa20.21■□□□□ 0.83
ATXN2-227ENST00000616825 CALM3P0DP25 149 aa20.21■□□□□ 0.83
ATXN2-227ENST00000616825 PPIP5K1Q6PFW1 1433 aa20.21■□□□□ 0.83
ATXN2-227ENST00000616825 CUL7Q14999 1698 aa20.21■□□□□ 0.83
ATXN2-227ENST00000616825 POLR3GO15318 223 aaPredicted RBP20.21■□□□□ 0.83
ATXN2-227ENST00000616825 KRT13P13646 458 aa20.21■□□□□ 0.83
ATXN2-227ENST00000616825 KIAA0753Q2KHM9 967 aa20.21■□□□□ 0.83
ATXN2-227ENST00000616825 DCAF5Q96JK2 942 aa20.21■□□□□ 0.83
ATXN2-227ENST00000616825 GCP02774 474 aa20.2■□□□□ 0.83
ATXN2-227ENST00000616825 ASIC1P78348 528 aa20.2■□□□□ 0.83
ATXN2-227ENST00000616825 ZSCAN23Q3MJ62 389 aa20.2■□□□□ 0.83
ATXN2-227ENST00000616825 GPATCH8Q9UKJ3 1502 aaKnown RBP20.2■□□□□ 0.82
ATXN2-227ENST00000616825 MARCKSP29966 332 aaPredicted RBP20.2■□□□□ 0.82
ATXN2-227ENST00000616825 UBE4AQ14139 1066 aa20.2■□□□□ 0.82
ATXN2-227ENST00000616825 ZSWIM4Q9H7M6 989 aa20.2■□□□□ 0.82
ATXN2-227ENST00000616825 C16orf71Q8IYS4 520 aaPredicted RBP20.2■□□□□ 0.82
ATXN2-227ENST00000616825 TBC1D5Q92609 795 aa20.2■□□□□ 0.82
ATXN2-227ENST00000616825 STAMBPO95630 424 aa20.2■□□□□ 0.82
ATXN2-227ENST00000616825 NMIQ13287 307 aaPredicted RBP20.2■□□□□ 0.82
ATXN2-227ENST00000616825 CABLES1Q8TDN4 633 aa20.2■□□□□ 0.82
ATXN2-227ENST00000616825 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
ATXN2-227ENST00000616825 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
ATXN2-227ENST00000616825 POLR3AO14802 1390 aaPredicted RBP20.2■□□□□ 0.82
ATXN2-227ENST00000616825 MAGEB6P1A0A0J9YX57 407 aa20.19■□□□□ 0.82
ATXN2-227ENST00000616825 IRS4O14654 1257 aaPredicted RBP20.19■□□□□ 0.82
ATXN2-227ENST00000616825 SPTLC2O15270 562 aa20.19■□□□□ 0.82
ATXN2-227ENST00000616825 SMARCC2Q8TAQ2 1214 aa20.19■□□□□ 0.82
ATXN2-227ENST00000616825 PICALMQ13492 652 aa20.19■□□□□ 0.82
ATXN2-227ENST00000616825 HELBQ8NG08 1087 aaPredicted RBP20.19■□□□□ 0.82
ATXN2-227ENST00000616825 CWF19L2Q2TBE0 894 aaKnown RBP20.19■□□□□ 0.82
ATXN2-227ENST00000616825 DRC1Q96MC2 740 aa20.19■□□□□ 0.82
ATXN2-227ENST00000616825 TCHPQ9BT92 498 aa20.19■□□□□ 0.82
ATXN2-227ENST00000616825 HOMER2Q9NSB8 354 aa20.19■□□□□ 0.82
ATXN2-227ENST00000616825 MCM9Q9NXL9 1143 aa20.19■□□□□ 0.82
ATXN2-227ENST00000616825 RTCBQ9Y3I0 505 aaKnown RBP20.19■□□□□ 0.82
ATXN2-227ENST00000616825 ZMYND15Q9H091 742 aa20.19■□□□□ 0.82
ATXN2-227ENST00000616825 RNF113AO15541 343 aaKnown RBP20.18■□□□□ 0.82
ATXN2-227ENST00000616825 F13A1P00488 732 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 CBX1P83916 185 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 KRT79Q5XKE5 535 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 USP48Q86UV5 1035 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 COMMD10Q9Y6G5 202 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 SBNO2Q9Y2G9 1366 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 SKILP12757 684 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 MMRN2Q9H8L6 949 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 PAXBP1Q9Y5B6 917 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 PHACTR2O75167 634 aa20.18■□□□□ 0.82
ATXN2-227ENST00000616825 EYA1Q99502 592 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms