RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 MCMDC2Q4G0Z9 681 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 CREB3L3Q68CJ9 461 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 RUFY3Q7L099 469 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 ANKS4BQ8N8V4 417 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 EXOC1Q9NV70 894 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 VAMP4O75379 141 aa21.48■■□□□ 1.03
SPAST-203ENST00000615843 TTF1Q15361 905 aaPredicted RBP21.48■■□□□ 1.03
SPAST-203ENST00000615843 MFSD6Q6ZSS7 791 aa21.48■■□□□ 1.03
SPAST-203ENST00000615843 BAG1Q99933 345 aaPredicted RBP21.48■■□□□ 1.03
SPAST-203ENST00000615843 C6orf163Q5TEZ5 329 aa21.48■■□□□ 1.03
SPAST-203ENST00000615843 PROSER2Q86WR7 435 aaPredicted RBP21.48■■□□□ 1.03
SPAST-203ENST00000615843 PPP1R9BQ96SB3 815 aa21.48■■□□□ 1.03
SPAST-203ENST00000615843 ARFGAP2Q8N6H7 521 aa21.48■■□□□ 1.03
SPAST-203ENST00000615843 SLC5A1P13866 664 aa21.47■■□□□ 1.03
SPAST-203ENST00000615843 C14orf93Q9H972 538 aaKnown RBP21.47■■□□□ 1.03
SPAST-203ENST00000615843 NOS1P29475 1434 aa21.47■■□□□ 1.03
SPAST-203ENST00000615843 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
SPAST-203ENST00000615843 WASLO00401 505 aaPredicted RBP21.47■■□□□ 1.03
SPAST-203ENST00000615843 CCDC129Q6ZRS4 1044 aa21.47■■□□□ 1.03
SPAST-203ENST00000615843 TTC41PQ6P2S7 1318 aa21.47■■□□□ 1.03
SPAST-203ENST00000615843 KIAA0586Q9BVV6 1533 aa21.47■■□□□ 1.03
SPAST-203ENST00000615843 PTCD1O75127 700 aaKnown RBP21.47■■□□□ 1.03
SPAST-203ENST00000615843 STARD3NLO95772 234 aa21.47■■□□□ 1.03
SPAST-203ENST00000615843 UBE3BQ7Z3V4 1068 aa21.47■■□□□ 1.03
SPAST-203ENST00000615843 CAVIN4Q5BKX8 364 aa21.46■■□□□ 1.03
SPAST-203ENST00000615843 SPTY2D1Q68D10 685 aaPredicted RBP21.46■■□□□ 1.03
SPAST-203ENST00000615843 SCLT1Q96NL6 688 aa21.46■■□□□ 1.03
SPAST-203ENST00000615843 MYL5Q02045 173 aa21.46■■□□□ 1.03
SPAST-203ENST00000615843 CCDC6Q16204 474 aa21.46■■□□□ 1.03
SPAST-203ENST00000615843 PAF1Q8N7H5 531 aa21.46■■□□□ 1.03
SPAST-203ENST00000615843 SELENOOQ9BVL4 669 aa21.46■■□□□ 1.03
SPAST-203ENST00000615843 PTPDC1A2A3K4 754 aa21.46■■□□□ 1.03
SPAST-203ENST00000615843 FAM160A1Q05DH4 1040 aa21.46■■□□□ 1.03
SPAST-203ENST00000615843 TSC1Q92574 1164 aa21.46■■□□□ 1.03
SPAST-203ENST00000615843 AFAP1L1Q8TED9 768 aa21.45■■□□□ 1.03
SPAST-203ENST00000615843 CBX8Q9HC52 389 aa21.45■■□□□ 1.03
SPAST-203ENST00000615843 KIF5BP33176 963 aa21.45■■□□□ 1.02
SPAST-203ENST00000615843 THEMISQ8N1K5 641 aaPredicted RBP21.45■■□□□ 1.02
SPAST-203ENST00000615843 TSPYL6Q8N831 410 aa21.45■■□□□ 1.02
SPAST-203ENST00000615843 CARD6Q9BX69 1037 aa21.45■■□□□ 1.02
SPAST-203ENST00000615843 TMEM63CQ9P1W3 806 aa21.45■■□□□ 1.02
SPAST-203ENST00000615843 PSMA7O14818 248 aa21.45■■□□□ 1.02
SPAST-203ENST00000615843 ANXA1P04083 346 aa21.45■■□□□ 1.02
SPAST-203ENST00000615843 STAT6P42226 847 aa21.45■■□□□ 1.02
SPAST-203ENST00000615843 VAV2P52735 878 aa21.45■■□□□ 1.02
SPAST-203ENST00000615843 PRAG1Q86YV5 1406 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 KIF4AO95239 1232 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 ZNF444Q8N0Y2 327 aaPredicted RBP21.44■■□□□ 1.02
SPAST-203ENST00000615843 DHX58Q96C10 678 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 CLSTN2Q9H4D0 955 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 CETN1Q12798 172 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 ZBTB7BO15156 539 aaPredicted RBP21.44■■□□□ 1.02
SPAST-203ENST00000615843 ZC3H6P61129 1189 aaKnown RBP21.44■■□□□ 1.02
SPAST-203ENST00000615843 CEP63Q96MT8 703 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 ANKRD18BA2A2Z9 1011 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 CPLX4Q7Z7G2 160 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 CCDC42Q96M95 316 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 SPAG5Q96R06 1193 aa21.44■■□□□ 1.02
SPAST-203ENST00000615843 GADD45BO75293 160 aaPredicted RBP21.43■■□□□ 1.02
SPAST-203ENST00000615843 FBLN1P23142 703 aa21.43■■□□□ 1.02
SPAST-203ENST00000615843 STX17P56962 302 aa21.43■■□□□ 1.02
SPAST-203ENST00000615843 WTAPQ15007 396 aa21.43■■□□□ 1.02
SPAST-203ENST00000615843 ATL3Q6DD88 541 aa21.43■■□□□ 1.02
SPAST-203ENST00000615843 ZSCAN29Q8IWY8 852 aaPredicted RBP21.43■■□□□ 1.02
SPAST-203ENST00000615843 SNAPC4Q5SXM2 1469 aa21.43■■□□□ 1.02
SPAST-203ENST00000615843 STAMBPO95630 424 aa21.43■■□□□ 1.02
SPAST-203ENST00000615843 BRAPQ7Z569 592 aa21.43■■□□□ 1.02
SPAST-203ENST00000615843 ABCA10Q8WWZ4 1543 aa21.43■■□□□ 1.02
SPAST-203ENST00000615843 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
SPAST-203ENST00000615843 RAPGEF3O95398 923 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 ZFYP08048 801 aaPredicted RBP21.42■■□□□ 1.02
SPAST-203ENST00000615843 CNGA4Q8IV77 575 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 A0A1W2PRG0 241 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 VGLL3A8MV65 326 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 CPA1P15085 419 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 APOBRQ0VD83 1088 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 LRRC27Q9C0I9 530 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 NUP160Q12769 1436 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 A0A1B0GVL5 298 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 AKR1B15C9JRZ8 316 aaPredicted RBP21.42■■□□□ 1.02
SPAST-203ENST00000615843 ATP5J2-PTCD1G3V325 749 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 NESP48681 1621 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 KIF14Q15058 1648 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 IFT140Q96RY7 1462 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 NBPF7P0C2Y1 421 aaPredicted RBP21.42■■□□□ 1.02
SPAST-203ENST00000615843 CFAP58Q5T655 872 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 TESK2Q96S53 571 aa21.42■■□□□ 1.02
SPAST-203ENST00000615843 CHMP4BP1P59074 171 aa21.41■■□□□ 1.02
SPAST-203ENST00000615843 STMN4Q9H169 189 aaPredicted RBP21.41■■□□□ 1.02
SPAST-203ENST00000615843 ZMYM4Q5VZL5 1548 aa21.41■■□□□ 1.02
SPAST-203ENST00000615843 PER1O15534 1290 aaPredicted RBP21.41■■□□□ 1.02
SPAST-203ENST00000615843 PRC1O43663 620 aa21.41■■□□□ 1.02
SPAST-203ENST00000615843 CTNNA2P26232 953 aa21.41■■□□□ 1.02
SPAST-203ENST00000615843 RTN1Q16799 776 aa21.41■■□□□ 1.02
SPAST-203ENST00000615843 UBXN1Q04323 297 aa21.41■■□□□ 1.02
SPAST-203ENST00000615843 IFT81Q8WYA0 676 aa21.41■■□□□ 1.02
SPAST-203ENST00000615843 RSRC1Q96IZ7 334 aaKnown RBP21.41■■□□□ 1.02
SPAST-203ENST00000615843 MPHOSPH10O00566 681 aaKnown RBP21.41■■□□□ 1.02
SPAST-203ENST00000615843 SELENOSQ9BQE4 189 aa21.41■■□□□ 1.02
SPAST-203ENST00000615843 CHPF2Q9P2E5 772 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms