RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 GIMAP7Q8NHV1 300 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 EFCAB5A4FU69 1503 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 A0A1W2PRG0 241 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 CTR9Q6PD62 1173 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 LMBR1LQ6UX01 489 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 CTAGE5O15320 804 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 LMOD1P29536 600 aaPredicted RBP21.35■■□□□ 1.01
GABPB1-212ENST00000615671 KRT23Q9C075 422 aa21.35■■□□□ 1.01
GABPB1-212ENST00000615671 ESPNB1AK53 854 aa21.35■■□□□ 1.01
GABPB1-212ENST00000615671 RTCBQ9Y3I0 505 aaKnown RBP21.35■■□□□ 1.01
GABPB1-212ENST00000615671 TTC21BQ7Z4L5 1316 aa21.35■■□□□ 1.01
GABPB1-212ENST00000615671 CCDC102BQ68D86 513 aa21.35■■□□□ 1.01
GABPB1-212ENST00000615671 HARSP12081 509 aaKnown RBP21.34■■□□□ 1.01
GABPB1-212ENST00000615671 RBM25P49756 843 aaKnown RBP21.34■■□□□ 1.01
GABPB1-212ENST00000615671 MCM9Q9NXL9 1143 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 TNNI2P48788 182 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 Q6ZUG5 572 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 GSTA5Q7RTV2 222 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 CCDC50Q8IVM0 306 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 ZC3H12CQ9C0D7 883 aaKnown RBP21.34■■□□□ 1.01
GABPB1-212ENST00000615671 SYKP43405 635 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 ASIC1P78348 528 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 RAB3GAP1Q15042 981 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 GIMAP6Q6P9H5 292 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 ESR2Q92731 530 aa21.34■■□□□ 1.01
GABPB1-212ENST00000615671 ZGPATQ8N5A5 531 aaKnown RBP21.34■■□□□ 1.01
GABPB1-212ENST00000615671 ADCY5O95622 1261 aa21.33■■□□□ 1.01
GABPB1-212ENST00000615671 NAA15Q9BXJ9 866 aaKnown RBP21.33■■□□□ 1.01
GABPB1-212ENST00000615671 HSPA2P54652 639 aa21.33■■□□□ 1.01
GABPB1-212ENST00000615671 ZKSCAN3Q9BRR0 538 aa21.33■■□□□ 1.01
GABPB1-212ENST00000615671 KIF14Q15058 1648 aa21.33■■□□□ 1.01
GABPB1-212ENST00000615671 KIAA0753Q2KHM9 967 aa21.33■■□□□ 1
GABPB1-212ENST00000615671 SPAG5Q96R06 1193 aa21.33■■□□□ 1
GABPB1-212ENST00000615671 ZMYND15Q9H091 742 aa21.33■■□□□ 1
GABPB1-212ENST00000615671 MAGI1Q96QZ7 1491 aaPredicted RBP21.33■■□□□ 1
GABPB1-212ENST00000615671 DHX58Q96C10 678 aa21.33■■□□□ 1
GABPB1-212ENST00000615671 SPDYE3A6NKU9 549 aa21.32■■□□□ 1
GABPB1-212ENST00000615671 CCDC175P0C221 793 aa21.32■■□□□ 1
GABPB1-212ENST00000615671 PDIA4P13667 645 aaKnown RBP21.32■■□□□ 1
GABPB1-212ENST00000615671 CCDC63Q8NA47 563 aa21.32■■□□□ 1
GABPB1-212ENST00000615671 ZRANB1Q9UGI0 708 aa21.32■■□□□ 1
GABPB1-212ENST00000615671 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
GABPB1-212ENST00000615671 MCM7P33993 719 aa21.32■■□□□ 1
GABPB1-212ENST00000615671 ZYXQ15942 572 aaKnown RBP21.32■■□□□ 1
GABPB1-212ENST00000615671 RHPN1Q8TCX5 695 aa21.32■■□□□ 1
GABPB1-212ENST00000615671 MEIS3Q99687 375 aa21.32■■□□□ 1
GABPB1-212ENST00000615671 EIF6P56537 245 aaKnown RBP21.32■■□□□ 1
GABPB1-212ENST00000615671 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
GABPB1-212ENST00000615671 PLEKHH1Q9ULM0 1364 aa21.32■■□□□ 1
GABPB1-212ENST00000615671 AKR1B10O60218 316 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 NCBP1Q09161 790 aaKnown RBP21.31■■□□□ 1
GABPB1-212ENST00000615671 FAM13AO94988 1023 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 PLB1Q6P1J6 1458 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 MCM3P25205 808 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 NBPF14Q5TI25 921 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 DDX23Q9BUQ8 820 aaKnown RBP21.31■■□□□ 1
GABPB1-212ENST00000615671 DDX19AQ9NUU7 478 aaKnown RBP21.31■■□□□ 1
GABPB1-212ENST00000615671 TTC22Q5TAA0 569 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 UIMC1Q96RL1 719 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 LRRC27Q9C0I9 530 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 TIAM1Q13009 1591 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 ABCC11Q96J66 1382 aa21.31■■□□□ 1
GABPB1-212ENST00000615671 BACH1O14867 736 aa21.3■■□□□ 1
GABPB1-212ENST00000615671 NBPF7P0C2Y1 421 aaPredicted RBP21.3■■□□□ 1
GABPB1-212ENST00000615671 GNPATO15228 680 aa21.3■■□□□ 1
GABPB1-212ENST00000615671 PPM1EQ8WY54 764 aa21.3■■□□□ 1
GABPB1-212ENST00000615671 RRP36Q96EU6 259 aaKnown RBP21.3■■□□□ 1
GABPB1-212ENST00000615671 C6orf50Q9HD87 102 aa21.3■■□□□ 1
GABPB1-212ENST00000615671 CNPY2Q9Y2B0 182 aa21.3■■□□□ 1
GABPB1-212ENST00000615671 SNW1Q13573 536 aaKnown RBP21.3■■□□□ 1
GABPB1-212ENST00000615671 TBC1D2Q9BYX2 928 aa21.3■■□□□ 1
GABPB1-212ENST00000615671 NCAPD3P42695 1498 aa21.3■■□□□ 1
GABPB1-212ENST00000615671 ZNF830Q96NB3 372 aaPredicted RBP21.29■■□□□ 1
GABPB1-212ENST00000615671 NYXQ9GZU5 481 aa21.29■■□□□ 1
GABPB1-212ENST00000615671 IMPG2Q9BZV3 1241 aa21.29■■□□□ 1
GABPB1-212ENST00000615671 CCDC24Q8N4L8 307 aa21.29■■□□□ 1
GABPB1-212ENST00000615671 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
GABPB1-212ENST00000615671 KAT6BQ8WYB5 2073 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 UBASH3AP57075 661 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 MXRA7P84157 204 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 KANK3Q6NY19 840 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 IRS4O14654 1257 aaPredicted RBP21.28■■□□□ 1
GABPB1-212ENST00000615671 NDC80O14777 642 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 CHMP2AO43633 222 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 GNG11P61952 73 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 RMND1Q9NWS8 449 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 RBM8AQ9Y5S9 174 aaKnown RBP21.28■■□□□ 1
GABPB1-212ENST00000615671 PKNOX2Q96KN3 472 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 SMIM23A6NLE4 172 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 ZSCAN30Q86W11 494 aa21.28■■□□□ 1
GABPB1-212ENST00000615671 PLCB3Q01970 1234 aa21.27■■□□□ 1
GABPB1-212ENST00000615671 ZNF165P49910 485 aa21.27■■□□□ 1
GABPB1-212ENST00000615671 NMIQ13287 307 aaPredicted RBP21.27■■□□□ 1
GABPB1-212ENST00000615671 CWF19L2Q2TBE0 894 aaKnown RBP21.27■■□□□ 1
GABPB1-212ENST00000615671 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
GABPB1-212ENST00000615671 GINS2Q9Y248 185 aa21.27■■□□□ 1
GABPB1-212ENST00000615671 MCMDC2Q4G0Z9 681 aa21.27■■□□□ 1
GABPB1-212ENST00000615671 TPTE2Q6XPS3 522 aa21.27■■□□□ 1
GABPB1-212ENST00000615671 GPCPD1Q9NPB8 672 aa21.27■■□□□ 1
GABPB1-212ENST00000615671 PAG1Q9NWQ8 432 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms