RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 HELBQ8NG08 1087 aaPredicted RBP21.52■■□□□ 1.04
SREK1-216ENST00000612404 RBM17Q96I25 401 aaKnown RBP21.52■■□□□ 1.04
SREK1-216ENST00000612404 BSDC1Q9NW68 430 aaPredicted RBP21.52■■□□□ 1.04
SREK1-216ENST00000612404 TLR7Q9NYK1 1049 aaKnown RBP21.52■■□□□ 1.04
SREK1-216ENST00000612404 GPATCH3Q96I76 525 aa21.52■■□□□ 1.03
SREK1-216ENST00000612404 GPR108Q9NPR9 543 aa21.52■■□□□ 1.03
SREK1-216ENST00000612404 AKAP2Q9Y2D5 859 aa21.52■■□□□ 1.03
SREK1-216ENST00000612404 KLRG2A4D1S0 409 aaPredicted RBP21.51■■□□□ 1.03
SREK1-216ENST00000612404 TIMM10P62072 90 aa21.51■■□□□ 1.03
SREK1-216ENST00000612404 GRAPQ13588 217 aa21.51■■□□□ 1.03
SREK1-216ENST00000612404 GRAPLQ8TC17 118 aaPredicted RBP21.51■■□□□ 1.03
SREK1-216ENST00000612404 OSBPL3Q9H4L5 887 aa21.51■■□□□ 1.03
SREK1-216ENST00000612404 STAP2Q9UGK3 403 aa21.51■■□□□ 1.03
SREK1-216ENST00000612404 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
SREK1-216ENST00000612404 A0A1B0GUL7 405 aa21.5■■□□□ 1.03
SREK1-216ENST00000612404 PDE8BO95263 885 aa21.5■■□□□ 1.03
SREK1-216ENST00000612404 TTC22Q5TAA0 569 aa21.5■■□□□ 1.03
SREK1-216ENST00000612404 ZNF609O15014 1411 aa21.5■■□□□ 1.03
SREK1-216ENST00000612404 CHRNDQ07001 517 aa21.49■■□□□ 1.03
SREK1-216ENST00000612404 VGLL2Q8N8G2 317 aa21.49■■□□□ 1.03
SREK1-216ENST00000612404 MTFR1LQ9H019 292 aa21.49■■□□□ 1.03
SREK1-216ENST00000612404 DBNLQ9UJU6 430 aaKnown RBP21.49■■□□□ 1.03
SREK1-216ENST00000612404 TAF5LO75529 589 aa21.49■■□□□ 1.03
SREK1-216ENST00000612404 ATP2B3Q16720 1220 aa21.49■■□□□ 1.03
SREK1-216ENST00000612404 BMP2KLQ5H9B9 411 aa21.49■■□□□ 1.03
SREK1-216ENST00000612404 DBNDD2Q9BQY9 259 aa21.49■■□□□ 1.03
SREK1-216ENST00000612404 ECHDC1Q9NTX5 307 aa21.49■■□□□ 1.03
SREK1-216ENST00000612404 SRGNP10124 158 aa21.48■■□□□ 1.03
SREK1-216ENST00000612404 GSPT1P15170 499 aaKnown RBP21.48■■□□□ 1.03
SREK1-216ENST00000612404 HOXA10P31260 410 aaPredicted RBP21.48■■□□□ 1.03
SREK1-216ENST00000612404 MINPP1Q9UNW1 487 aa21.48■■□□□ 1.03
SREK1-216ENST00000612404 AOX1Q06278 1338 aa21.48■■□□□ 1.03
SREK1-216ENST00000612404 TTC41PQ6P2S7 1318 aa21.48■■□□□ 1.03
SREK1-216ENST00000612404 ERC2O15083 957 aa21.47■■□□□ 1.03
SREK1-216ENST00000612404 NPR1P16066 1061 aa21.47■■□□□ 1.03
SREK1-216ENST00000612404 PUM3Q15397 648 aaKnown RBP21.47■■□□□ 1.03
SREK1-216ENST00000612404 POLD1P28340 1107 aa21.46■■□□□ 1.03
SREK1-216ENST00000612404 C2CD5Q86YS7 1000 aa21.46■■□□□ 1.03
SREK1-216ENST00000612404 PI4K2BQ8TCG2 481 aa21.46■■□□□ 1.03
SREK1-216ENST00000612404 CRAMP1Q96RY5 1269 aa21.46■■□□□ 1.03
SREK1-216ENST00000612404 GORABQ5T7V8 394 aa21.46■■□□□ 1.03
SREK1-216ENST00000612404 H0YIN7 160 aa21.45■■□□□ 1.02
SREK1-216ENST00000612404 GLRX3O76003 335 aaKnown RBP21.45■■□□□ 1.02
SREK1-216ENST00000612404 XAGE2Q96GT9 111 aa21.45■■□□□ 1.02
SREK1-216ENST00000612404 SNAP23O00161 211 aa21.44■■□□□ 1.02
SREK1-216ENST00000612404 ADORA1P30542 326 aa21.44■■□□□ 1.02
SREK1-216ENST00000612404 ZNF622Q969S3 477 aaKnown RBP eCLIP21.44■■□□□ 1.02
SREK1-216ENST00000612404 MASTLQ96GX5 879 aa21.44■■□□□ 1.02
SREK1-216ENST00000612404 COL11A2P13942 1736 aaPredicted RBP21.44■■□□□ 1.02
SREK1-216ENST00000612404 BBOX1O75936 387 aa21.44■■□□□ 1.02
SREK1-216ENST00000612404 LPIN2Q92539 896 aa21.44■■□□□ 1.02
SREK1-216ENST00000612404 TRIM6-TRIM34B2RNG4 842 aa21.43■■□□□ 1.02
SREK1-216ENST00000612404 ANKRD2Q9GZV1 360 aa21.43■■□□□ 1.02
SREK1-216ENST00000612404 MAP4K4O95819 1239 aaPredicted RBP21.43■■□□□ 1.02
SREK1-216ENST00000612404 SLC5A1P13866 664 aa21.43■■□□□ 1.02
SREK1-216ENST00000612404 SDSP20132 328 aa21.43■■□□□ 1.02
SREK1-216ENST00000612404 FGFR2P21802 821 aa21.43■■□□□ 1.02
SREK1-216ENST00000612404 CHRNA5P30532 468 aa21.43■■□□□ 1.02
SREK1-216ENST00000612404 ALDH1B1P30837 517 aa21.43■■□□□ 1.02
SREK1-216ENST00000612404 C10orf71Q711Q0 1435 aa21.43■■□□□ 1.02
SREK1-216ENST00000612404 SLC51AQ86UW1 340 aa21.42■■□□□ 1.02
SREK1-216ENST00000612404 IFIT1P09914 478 aaKnown RBP21.41■■□□□ 1.02
SREK1-216ENST00000612404 KCNJ4P48050 445 aa21.41■■□□□ 1.02
SREK1-216ENST00000612404 CCDC158Q5M9N0 1113 aa21.41■■□□□ 1.02
SREK1-216ENST00000612404 RILPL2Q969X0 211 aa21.41■■□□□ 1.02
SREK1-216ENST00000612404 BOLA2Q9H3K6 86 aa21.41■■□□□ 1.02
SREK1-216ENST00000612404 ANKIB1Q9P2G1 1089 aa21.41■■□□□ 1.02
SREK1-216ENST00000612404 A0A1B0GUL6 1792 aa21.41■■□□□ 1.02
SREK1-216ENST00000612404 PPEF1O14829 653 aaPredicted RBP21.41■■□□□ 1.02
SREK1-216ENST00000612404 C8orf34Q49A92 452 aa21.41■■□□□ 1.02
SREK1-216ENST00000612404 ATP5JP18859 108 aa21.4■■□□□ 1.02
SREK1-216ENST00000612404 TTC39AQ5SRH9 613 aa21.4■■□□□ 1.02
SREK1-216ENST00000612404 GOLGB1Q14789 3259 aaKnown RBP21.4■■□□□ 1.02
SREK1-216ENST00000612404 STYK1Q6J9G0 422 aa21.4■■□□□ 1.02
SREK1-216ENST00000612404 WTIPA6NIX2 430 aaPredicted RBP21.39■■□□□ 1.01
SREK1-216ENST00000612404 UBE4AQ14139 1066 aa21.39■■□□□ 1.01
SREK1-216ENST00000612404 TMC4Q7Z404 712 aa21.39■■□□□ 1.01
SREK1-216ENST00000612404 BACH2Q9BYV9 841 aa21.38■■□□□ 1.01
SREK1-216ENST00000612404 XDHP47989 1333 aa21.37■■□□□ 1.01
SREK1-216ENST00000612404 CNTROBQ8N137 903 aa21.37■■□□□ 1.01
SREK1-216ENST00000612404 DNAJC2Q99543 621 aaKnown RBP21.37■■□□□ 1.01
SREK1-216ENST00000612404 PPP1R1BQ9UD71 204 aaPredicted RBP21.37■■□□□ 1.01
SREK1-216ENST00000612404 NSFL1CQ9UNZ2 370 aaKnown RBP21.37■■□□□ 1.01
SREK1-216ENST00000612404 CACNA1SQ13698 1873 aa21.37■■□□□ 1.01
SREK1-216ENST00000612404 ZNF804BA4D1E1 1349 aa21.37■■□□□ 1.01
SREK1-216ENST00000612404 ARAP2Q8WZ64 1704 aa21.37■■□□□ 1.01
SREK1-216ENST00000612404 GPSM2P81274 684 aa21.37■■□□□ 1.01
SREK1-216ENST00000612404 SP8Q8IXZ3 490 aa21.37■■□□□ 1.01
SREK1-216ENST00000612404 ATP6V0A2Q9Y487 856 aa21.37■■□□□ 1.01
SREK1-216ENST00000612404 CDC45O75419 566 aa21.36■■□□□ 1.01
SREK1-216ENST00000612404 PHKA1P46020 1223 aa21.36■■□□□ 1.01
SREK1-216ENST00000612404 CCDC102BQ68D86 513 aa21.36■■□□□ 1.01
SREK1-216ENST00000612404 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
SREK1-216ENST00000612404 TMX4Q9H1E5 349 aaPredicted RBP21.36■■□□□ 1.01
SREK1-216ENST00000612404 NDUFB9Q9Y6M9 179 aa21.36■■□□□ 1.01
SREK1-216ENST00000612404 A0A0G2JLW4 131 aa21.35■■□□□ 1.01
SREK1-216ENST00000612404 PRPF40BQ6NWY9 871 aaKnown RBP21.35■■□□□ 1.01
SREK1-216ENST00000612404 KLHL34Q8N239 644 aa21.35■■□□□ 1.01
SREK1-216ENST00000612404 SGIP1Q9BQI5 828 aa21.35■■□□□ 1.01
SREK1-216ENST00000612404 BCAMP50895 628 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms