RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 GGA1Q9UJY5 639 aa24.45■■□□□ 1.5
TCF3-219ENST00000610756 MINPP1Q9UNW1 487 aa24.45■■□□□ 1.5
TCF3-219ENST00000610756 RIMBP2O15034 1052 aa24.44■■□□□ 1.5
TCF3-219ENST00000610756 ITGA6P23229 1130 aa24.44■■□□□ 1.5
TCF3-219ENST00000610756 SCN4AP35499 1836 aa24.44■■□□□ 1.5
TCF3-219ENST00000610756 XDHP47989 1333 aa24.44■■□□□ 1.5
TCF3-219ENST00000610756 YDJCA8MPS7 323 aa24.43■■□□□ 1.5
TCF3-219ENST00000610756 LMOD1P29536 600 aaPredicted RBP24.43■■□□□ 1.5
TCF3-219ENST00000610756 IGHMBP2P38935 993 aaKnown RBP24.43■■□□□ 1.5
TCF3-219ENST00000610756 RAD17O75943 681 aa24.42■■□□□ 1.5
TCF3-219ENST00000610756 UFL1O94874 794 aa24.42■■□□□ 1.5
TCF3-219ENST00000610756 ATP2B4P23634 1241 aa24.42■■□□□ 1.5
TCF3-219ENST00000610756 EAPPQ56P03 285 aaPredicted RBP24.42■■□□□ 1.5
TCF3-219ENST00000610756 EPS15P42566 896 aa24.41■■□□□ 1.5
TCF3-219ENST00000610756 FAM161AQ3B820 660 aa24.41■■□□□ 1.5
TCF3-219ENST00000610756 BCL2L13Q9BXK5 485 aa24.41■■□□□ 1.5
TCF3-219ENST00000610756 BRPF1P55201 1214 aaPredicted RBP24.4■■□□□ 1.5
TCF3-219ENST00000610756 DNAJC5GQ8N7S2 189 aa24.4■■□□□ 1.5
TCF3-219ENST00000610756 GPR101Q96P66 508 aaPredicted RBP24.4■■□□□ 1.5
TCF3-219ENST00000610756 DBNDD1Q9H9R9 158 aa24.4■■□□□ 1.5
TCF3-219ENST00000610756 SMC4Q9NTJ3 1288 aa24.4■■□□□ 1.5
TCF3-219ENST00000610756 GPRC5DQ9NZD1 345 aa24.4■■□□□ 1.5
TCF3-219ENST00000610756 UTYO14607 1347 aa24.4■■□□□ 1.5
TCF3-219ENST00000610756 ANKRD18BA2A2Z9 1011 aa24.39■■□□□ 1.5
TCF3-219ENST00000610756 IFIT5Q13325 482 aaKnown RBP24.39■■□□□ 1.5
TCF3-219ENST00000610756 DOK7Q18PE1 504 aa24.39■■□□□ 1.5
TCF3-219ENST00000610756 LMBR1LQ6UX01 489 aa24.39■■□□□ 1.5
TCF3-219ENST00000610756 USP50Q70EL3 339 aaPredicted RBP24.39■■□□□ 1.5
TCF3-219ENST00000610756 MPHOSPH8Q99549 860 aa24.39■■□□□ 1.5
TCF3-219ENST00000610756 CLEC11AQ9Y240 323 aa24.39■■□□□ 1.5
TCF3-219ENST00000610756 ECE2O60344 883 aa24.38■■□□□ 1.49
TCF3-219ENST00000610756 GMPSP49915 693 aaPredicted RBP24.38■■□□□ 1.49
TCF3-219ENST00000610756 EPHA10Q5JZY3 1008 aa24.38■■□□□ 1.49
TCF3-219ENST00000610756 NBPF7P0C2Y1 421 aaPredicted RBP24.37■■□□□ 1.49
TCF3-219ENST00000610756 LTBP1Q14766 1721 aa24.37■■□□□ 1.49
TCF3-219ENST00000610756 ANKRD2Q9GZV1 360 aa24.37■■□□□ 1.49
TCF3-219ENST00000610756 ADARB2Q9NS39 739 aaKnown RBP24.37■■□□□ 1.49
TCF3-219ENST00000610756 LEMD3Q9Y2U8 911 aa24.37■■□□□ 1.49
TCF3-219ENST00000610756 G3V3G9 751 aa24.36■■□□□ 1.49
TCF3-219ENST00000610756 ITGBL1O95965 494 aaPredicted RBP24.36■■□□□ 1.49
TCF3-219ENST00000610756 CCT4P50991 539 aaKnown RBP24.36■■□□□ 1.49
TCF3-219ENST00000610756 DCAF8Q5TAQ9 597 aa24.36■■□□□ 1.49
TCF3-219ENST00000610756 DPF2Q92785 391 aa24.36■■□□□ 1.49
TCF3-219ENST00000610756 KCNQ5Q9NR82 932 aa24.36■■□□□ 1.49
TCF3-219ENST00000610756 WTIPA6NIX2 430 aaPredicted RBP24.35■■□□□ 1.49
TCF3-219ENST00000610756 PSMD14O00487 310 aa24.35■■□□□ 1.49
TCF3-219ENST00000610756 RARSP54136 660 aaKnown RBP24.35■■□□□ 1.49
TCF3-219ENST00000610756 CCDC57Q2TAC2 916 aa24.35■■□□□ 1.49
TCF3-219ENST00000610756 KAZALD1Q96I82 304 aa24.35■■□□□ 1.49
TCF3-219ENST00000610756 CHMP3Q9Y3E7 222 aa24.35■■□□□ 1.49
TCF3-219ENST00000610756 MYH3P11055 1940 aa24.35■■□□□ 1.49
TCF3-219ENST00000610756 HTRA3P83110 453 aa24.35■■□□□ 1.49
TCF3-219ENST00000610756 HNRNPUQ00839 825 aaKnown RBP eCLIP24.35■■□□□ 1.49
TCF3-219ENST00000610756 CNTROBQ8N137 903 aa24.35■■□□□ 1.49
TCF3-219ENST00000610756 CNOT7Q9UIV1 285 aaKnown RBP24.35■■□□□ 1.49
TCF3-219ENST00000610756 NOB1Q9ULX3 412 aaKnown RBP24.35■■□□□ 1.49
TCF3-219ENST00000610756 VIL1P09327 827 aaKnown RBP24.34■■□□□ 1.49
TCF3-219ENST00000610756 PODNQ7Z5L7 613 aa24.34■■□□□ 1.49
TCF3-219ENST00000610756 SUCLG2Q96I99 432 aa24.34■■□□□ 1.49
TCF3-219ENST00000610756 USP44Q9H0E7 712 aa24.34■■□□□ 1.49
TCF3-219ENST00000610756 PASKQ96RG2 1323 aa24.33■■□□□ 1.49
TCF3-219ENST00000610756 RPS12P25398 132 aaKnown RBP24.33■■□□□ 1.48
TCF3-219ENST00000610756 CHRNDQ07001 517 aa24.33■■□□□ 1.48
TCF3-219ENST00000610756 ZBTB12Q9Y330 459 aaPredicted RBP24.33■■□□□ 1.48
TCF3-219ENST00000610756 H7C1D1 291 aa24.32■■□□□ 1.48
TCF3-219ENST00000610756 MAP1SQ66K74 1059 aaPredicted RBP24.32■■□□□ 1.48
TCF3-219ENST00000610756 ZNF804BA4D1E1 1349 aa24.32■■□□□ 1.48
TCF3-219ENST00000610756 MED23Q9ULK4 1368 aa24.31■■□□□ 1.48
TCF3-219ENST00000610756 LDHAL6AQ6ZMR3 332 aa24.31■■□□□ 1.48
TCF3-219ENST00000610756 ARHGAP45Q92619 1136 aa24.31■■□□□ 1.48
TCF3-219ENST00000610756 API5Q9BZZ5 524 aaKnown RBP24.31■■□□□ 1.48
TCF3-219ENST00000610756 RABL6Q3YEC7 729 aaPredicted RBP24.3■■□□□ 1.48
TCF3-219ENST00000610756 BICC1Q9H694 974 aaKnown RBP24.3■■□□□ 1.48
TCF3-219ENST00000610756 CREBZFQ9NS37 354 aa24.3■■□□□ 1.48
TCF3-219ENST00000610756 PGAP2Q9UHJ9 254 aa24.3■■□□□ 1.48
TCF3-219ENST00000610756 ADAMTSL1Q8N6G6 1762 aa24.29■■□□□ 1.48
TCF3-219ENST00000610756 HIRAP54198 1017 aaPredicted RBP24.29■■□□□ 1.48
TCF3-219ENST00000610756 TAF7LQ5H9L4 462 aa24.29■■□□□ 1.48
TCF3-219ENST00000610756 MICALL2Q8IY33 904 aa24.29■■□□□ 1.48
TCF3-219ENST00000610756 ZC3H15Q8WU90 426 aaKnown RBP24.29■■□□□ 1.48
TCF3-219ENST00000610756 KLRG1Q96E93 195 aa24.29■■□□□ 1.48
TCF3-219ENST00000610756 ZNF594Q96JF6 807 aaPredicted RBP24.29■■□□□ 1.48
TCF3-219ENST00000610756 COA1Q9GZY4 146 aa24.29■■□□□ 1.48
TCF3-219ENST00000610756 TXNRD3Q86VQ6 643 aa24.28■■□□□ 1.48
TCF3-219ENST00000610756 USP17L3A6NCW0 530 aa24.27■■□□□ 1.48
TCF3-219ENST00000610756 USP17L4A6NCW7 530 aa24.27■■□□□ 1.48
TCF3-219ENST00000610756 USP17L1Q7RTZ2 530 aa24.27■■□□□ 1.48
TCF3-219ENST00000610756 AGBL3Q8NEM8 1001 aa24.27■■□□□ 1.48
TCF3-219ENST00000610756 KIF16BQ96L93 1317 aa24.26■■□□□ 1.47
TCF3-219ENST00000610756 SHTN1A0MZ66 631 aa24.26■■□□□ 1.47
TCF3-219ENST00000610756 TAF5LO75529 589 aa24.26■■□□□ 1.47
TCF3-219ENST00000610756 KCNJ4P48050 445 aa24.26■■□□□ 1.47
TCF3-219ENST00000610756 RSBN1LQ6PCB5 846 aaPredicted RBP24.26■■□□□ 1.47
TCF3-219ENST00000610756 C15orf52Q6ZUT6 534 aaKnown RBP24.26■■□□□ 1.47
TCF3-219ENST00000610756 ANKRD44Q8N8A2 993 aa24.26■■□□□ 1.47
TCF3-219ENST00000610756 HELBQ8NG08 1087 aaPredicted RBP24.26■■□□□ 1.47
TCF3-219ENST00000610756 CNNM1Q9NRU3 951 aa24.26■■□□□ 1.47
TCF3-219ENST00000610756 TRPM4Q8TD43 1214 aa24.25■■□□□ 1.47
TCF3-219ENST00000610756 TMEM88BA6NKF7 163 aa24.24■■□□□ 1.47
TCF3-219ENST00000610756 IPO8O15397 1037 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms