RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 KIF18AQ8NI77 898 aa12.07□□□□□ -0.48
CTCFL-216ENST00000608263 RAI14Q9P0K7 980 aa12.07□□□□□ -0.48
CTCFL-216ENST00000608263 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
CTCFL-216ENST00000608263 LEO1Q8WVC0 666 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-216ENST00000608263 SETD1BQ9UPS6 1966 aaKnown RBP12.07□□□□□ -0.48
CTCFL-216ENST00000608263 KIF24Q5T7B8 1368 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 PTPDC1A2A3K4 754 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 NR1I2O75469 434 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 SLC3A2P08195 630 aaKnown RBP12.06□□□□□ -0.48
CTCFL-216ENST00000608263 RPS6KB1P23443 525 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 STX1AQ16623 288 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 MCMDC2Q4G0Z9 681 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-216ENST00000608263 MYRIPQ8NFW9 859 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 ZNF652Q9Y2D9 606 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 IFIT5Q13325 482 aaKnown RBP12.06□□□□□ -0.48
CTCFL-216ENST00000608263 CPLX3Q8WVH0 158 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 ZNF594Q96JF6 807 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-216ENST00000608263 ZSWIM4Q9H7M6 989 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 STAP2Q9UGK3 403 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 ABCC3O15438 1527 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 C6orf229H3BNL8 230 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
CTCFL-216ENST00000608263 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-216ENST00000608263 CYP2E1P05181 493 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-216ENST00000608263 SLC4A8Q2Y0W8 1093 aa12.05□□□□□ -0.48
CTCFL-216ENST00000608263 FTOQ9C0B1 505 aaKnown RBP eCLIP12.05□□□□□ -0.48
CTCFL-216ENST00000608263 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
CTCFL-216ENST00000608263 ARGLU1Q9NWB6 273 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-216ENST00000608263 HMG20BQ9P0W2 317 aa12.05□□□□□ -0.48
CTCFL-216ENST00000608263 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-216ENST00000608263 POLR3GO15318 223 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-216ENST00000608263 LDHAL6AQ6ZMR3 332 aa12.05□□□□□ -0.48
CTCFL-216ENST00000608263 ZNF622Q969S3 477 aaKnown RBP eCLIP12.05□□□□□ -0.486e-15■□□□□ 10.1
CTCFL-216ENST00000608263 CGNQ9P2M7 1197 aaKnown RBP12.05□□□□□ -0.48
CTCFL-216ENST00000608263 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
CTCFL-216ENST00000608263 CCDC69A6NI79 296 aa12.05□□□□□ -0.48
CTCFL-216ENST00000608263 UBXN4Q92575 508 aa12.05□□□□□ -0.48
CTCFL-216ENST00000608263 CCDC94Q9BW85 323 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-216ENST00000608263 RGS12O14924 1447 aa12.05□□□□□ -0.48
CTCFL-216ENST00000608263 ZNF213O14771 459 aa12.04□□□□□ -0.48
CTCFL-216ENST00000608263 PI4K2BQ8TCG2 481 aa12.04□□□□□ -0.48
CTCFL-216ENST00000608263 TFCP2L1Q9NZI6 479 aa12.04□□□□□ -0.48
CTCFL-216ENST00000608263 CEP152O94986 1710 aa12.04□□□□□ -0.48
CTCFL-216ENST00000608263 SLFNL1Q499Z3 407 aa12.04□□□□□ -0.48
CTCFL-216ENST00000608263 ZNF589Q86UQ0 364 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-216ENST00000608263 CTNNA3Q9UI47 895 aa12.04□□□□□ -0.48
CTCFL-216ENST00000608263 HOOK1Q9UJC3 728 aaKnown RBP12.04□□□□□ -0.48
CTCFL-216ENST00000608263 KCNQ4P56696 695 aa12.04□□□□□ -0.48
CTCFL-216ENST00000608263 DDX21Q9NR30 783 aaKnown RBP eCLIP12.04□□□□□ -0.48
CTCFL-216ENST00000608263 TPM1P09493 284 aa12.03□□□□□ -0.48
CTCFL-216ENST00000608263 NBPF5PQ86XG9 351 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-216ENST00000608263 JMYQ8N9B5 988 aa12.03□□□□□ -0.48
CTCFL-216ENST00000608263 ZSCAN16Q9H4T2 348 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-216ENST00000608263 GNL3LQ9NVN8 582 aaKnown RBP12.03□□□□□ -0.48
CTCFL-216ENST00000608263 MLH3Q9UHC1 1453 aa12.03□□□□□ -0.48
CTCFL-216ENST00000608263 SNW1Q13573 536 aaKnown RBP12.03□□□□□ -0.48
CTCFL-216ENST00000608263 PAG1Q9NWQ8 432 aa12.03□□□□□ -0.48
CTCFL-216ENST00000608263 USP21Q9UK80 565 aa12.03□□□□□ -0.48
CTCFL-216ENST00000608263 A1BGP04217 495 aa12.02□□□□□ -0.48
CTCFL-216ENST00000608263 TDO2P48775 406 aa12.02□□□□□ -0.48
CTCFL-216ENST00000608263 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.48
CTCFL-216ENST00000608263 ZNF496Q96IT1 587 aaPredicted RBP12.02□□□□□ -0.48
CTCFL-216ENST00000608263 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.02□□□□□ -0.481e-6■□□□□ 10.8
CTCFL-216ENST00000608263 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.48
CTCFL-216ENST00000608263 IFNKQ9P0W0 207 aa12.02□□□□□ -0.48
CTCFL-216ENST00000608263 MINDY4BA8MYZ0 360 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 GIGYF1O75420 1035 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-216ENST00000608263 TEX35Q5T0J7 233 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 AIDAQ96BJ3 306 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 NIP7Q9Y221 180 aaKnown RBP eCLIP12.02□□□□□ -0.49
CTCFL-216ENST00000608263 ADGRB3O60242 1522 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 PPRC1Q5VV67 1664 aaKnown RBP12.02□□□□□ -0.49
CTCFL-216ENST00000608263 HMGB1P09429 215 aaKnown RBP12.02□□□□□ -0.49
CTCFL-216ENST00000608263 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
CTCFL-216ENST00000608263 TNNI3KQ59H18 835 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 PDLIM2Q96JY6 352 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 FPGT-TNNI3KV9GXZ4 949 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 CTAGE5O15320 804 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 ZNF75DP51815 510 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 ZNF790Q6PG37 636 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 DHX32Q7L7V1 743 aaKnown RBP12.02□□□□□ -0.49
CTCFL-216ENST00000608263 MRPS27Q92552 414 aaKnown RBP12.02□□□□□ -0.49
CTCFL-216ENST00000608263 DNAI1Q9UI46 699 aa12.02□□□□□ -0.49
CTCFL-216ENST00000608263 CHGBP05060 677 aa12.01□□□□□ -0.49
CTCFL-216ENST00000608263 TOP1P11387 765 aaKnown RBP12.01□□□□□ -0.49
CTCFL-216ENST00000608263 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
CTCFL-216ENST00000608263 CNNM3Q8NE01 707 aa12.01□□□□□ -0.49
CTCFL-216ENST00000608263 RPGRQ92834 1020 aaKnown RBP12.01□□□□□ -0.49
CTCFL-216ENST00000608263 CWC25Q9NXE8 425 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-216ENST00000608263 AOX1Q06278 1338 aa12.01□□□□□ -0.49
CTCFL-216ENST00000608263 IGSF1Q8N6C5 1336 aa12.01□□□□□ -0.49
CTCFL-216ENST00000608263 PTPN21Q16825 1174 aa12.01□□□□□ -0.49
CTCFL-216ENST00000608263 CLEC17AQ6ZS10 378 aa12.01□□□□□ -0.49
CTCFL-216ENST00000608263 GOLGA6L1Q8N7Z2 621 aa12.01□□□□□ -0.49
CTCFL-216ENST00000608263 ARHGEF10O15013 1369 aa12□□□□□ -0.49
CTCFL-216ENST00000608263 MED14O60244 1454 aa12□□□□□ -0.49
CTCFL-216ENST00000608263 ATP7BP35670 1465 aa12□□□□□ -0.49
CTCFL-216ENST00000608263 DCAF8L1A6NGE4 600 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms